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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • KLF6
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:16.6 nTPM
GTEx:10.3 nTPM
FANTOM5:25.7 Scaled Tags Per Million
Macaque:10.5 nTPM
Pig:9.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.6
Sample id Sample description nTPM
Putamen
nTPM: 16.6
2482 Female, age 94, left hemisphere 21.9
2489 Female, age 72, unknown 20.2
2647 Male, age 75, left hemisphere 19.2
1937 Female, age 91, right hemisphere 14.5
2466 Female, age 79, unknown 14.5
1829 Male, age 74, unknown 13.7
1838 Male, age 80, right hemisphere 12.3

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 10.3
Samples: 254

Max nTPM: 33.3
Min nTPM: 3.0
Std nTPM: 5.7
Median nTPM: 8.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 33.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 32.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 30.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 30.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 29.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 29.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 28.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 27.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 25.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 22.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 22.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 21.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 20.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 20.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 19.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 19.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 19.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 19.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 19.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 18.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 18.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 18.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 18.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 18.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 17.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 17.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 17.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 17.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 17.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 16.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 16.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 16.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 16.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 16.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 15.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 15.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 15.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 15.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 15.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 15.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 15.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 14.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 14.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 14.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 14.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 14.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 14.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 14.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 14.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 13.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 13.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 13.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 13.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 13.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 13.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 13.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 13.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 13.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 13.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 13.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 12.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 12.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 12.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 12.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 12.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 12.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 12.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 12.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 12.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 11.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 11.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 11.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 11.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 11.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 11.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 11.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 11.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 11.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 11.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 11.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 11.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 11.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 10.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 10.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 10.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 10.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 10.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 10.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 10.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 10.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 10.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 10.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 10.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 10.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 9.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 9.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 9.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 9.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 9.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 9.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 9.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 9.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 9.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 9.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 9.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 9.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 9.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 9.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 9.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 9.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 9.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 9.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 8.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 8.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 8.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 8.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 8.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 8.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 8.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 8.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 8.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 8.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 8.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 8.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 8.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 8.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 8.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 8.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 8.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 8.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 8.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 7.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 7.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 7.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 7.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 7.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 7.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 7.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 7.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 7.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 7.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 7.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 7.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 7.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 7.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 7.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 7.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 7.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 7.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 7.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 7.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 7.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 6.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 6.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 6.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 6.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 6.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 6.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 6.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 6.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 6.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 6.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 6.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 6.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 6.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 6.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 6.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 6.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 6.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 6.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 6.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 6.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 6.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 6.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 6.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 6.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 6.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 6.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 6.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 6.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 5.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 5.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 5.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 5.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 5.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 5.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 5.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 5.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 5.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 5.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 5.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 5.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 5.2
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 5.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 5.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 5.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 5.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 5.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 5.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 5.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 5.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 4.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 4.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 4.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 4.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 4.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 4.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 4.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 4.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 4.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 4.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 4.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 4.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 4.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 4.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 4.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 4.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 3.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 3.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 3.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 3.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 3.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 3.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 3.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 3.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 3.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 3.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 3.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

25.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 25.7
FF:10176-103C5 60 years, female 25.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.5
Macaque sample Sample description nTPM
Putamen
nTPM: 10.6
Samples: 2

Max nTPM: 10.6
Min nTPM: 10.5
Sample A 10.5
Sample B 10.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.1
Pig sample Sample description nTPM
Putamen
nTPM: 9.1
Samples: 3

Max nTPM: 9.6
Min nTPM: 8.0
Sample B Female 8.0
Sample C Male 9.6
Sample D Male 9.6

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