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  • PDZD4
IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:0.4 nTPM
Monaco:9.6 nTPM
Schmiedel:161.3 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

0.4
HPA sample nTPM
NK-cell
nTPM: 0.4
Samples: 6

Max nTPM: 1.2
Min nTPM: 0.0
P10809_1013 0.8
P10809_1033 1.2
P10809_1052 0.3
P10809_1071 0.0
P10809_1093 0.1
P10809_1103 0.3

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

9.6
Monaco sample nTPM
NK-cell
nTPM: 9.6
Samples: 4

Max nTPM: 15.4
Min nTPM: 2.2
RHH5316_R3683 15.4
RHH5224_R3596 2.2
RHH5253_R3625 9.0
RHH5282_R3654 11.8

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

161.3
Schmiedel sample id TPM
NK-cell
TPM: 161.3
Samples: 90

Max TPM: 362.0
Min TPM: 20.7
NK_1 362.0
NK_2 357.5
NK_3 340.3
NK_4 333.5
NK_5 325.7
NK_6 317.1
NK_7 299.9
NK_8 290.2
NK_9 283.1
NK_10 272.4
NK_11 270.6
NK_12 269.7
NK_13 267.6
NK_14 257.9
NK_15 251.9
NK_16 240.8
NK_17 239.6
NK_18 232.6
NK_19 229.2
NK_20 228.1
NK_21 211.0
NK_22 204.2
NK_23 200.1
NK_24 198.9
NK_25 194.9
NK_26 194.0
NK_27 193.7
NK_28 190.6
NK_29 186.2
NK_30 181.1
NK_31 178.7
NK_32 177.4
NK_33 177.2
NK_34 176.7
NK_35 176.0
NK_36 173.6
NK_37 169.1
NK_38 166.3
NK_39 165.3
NK_40 164.9
NK_41 162.0
NK_42 161.5
NK_43 159.1
NK_44 155.1
NK_45 150.1
NK_46 147.5
NK_47 146.0
NK_48 146.0
NK_49 145.1
NK_50 144.8
NK_51 144.4
NK_52 140.2
NK_53 138.6
NK_54 135.0
NK_55 126.0
NK_56 124.3
NK_57 121.6
NK_58 116.8
NK_59 116.7
NK_60 116.4
NK_61 116.3
NK_62 112.3
NK_63 112.2
NK_64 110.6
NK_65 109.6
NK_66 103.4
NK_67 101.8
NK_68 95.8
NK_69 93.7
NK_70 93.4
NK_71 93.0
NK_72 92.3
NK_73 90.3
NK_74 88.2
NK_75 83.5
NK_76 83.0
NK_77 81.8
NK_78 76.2
NK_79 75.0
NK_80 74.0
NK_81 63.9
NK_82 63.0
NK_83 59.3
NK_84 53.8
NK_85 51.8
NK_86 51.6
NK_87 51.1
NK_88 39.8
NK_89 29.8
NK_90 20.7
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