A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
6.6
nTPM
Monaco:
124.1
nTPM
Schmiedel:
128.1
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
6.6
HPA sample
nTPM
NK-cell nTPM: 6.6
Samples: 6
Max nTPM: 14.3
Min nTPM: 2.8
P10809_1013
3.6
P10809_1033
4.2
P10809_1052
5.1
P10809_1071
9.5
P10809_1093
14.3
P10809_1103
2.8
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
124.1
Monaco sample
nTPM
NK-cell nTPM: 124.1
Samples: 4
Max nTPM: 171.2
Min nTPM: 83.0
RHH5316_R3683
83.0
RHH5224_R3596
86.2
RHH5253_R3625
171.2
RHH5282_R3654
156.0
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
128.1
Schmiedel sample id
TPM
NK-cell TPM: 128.1
Samples: 90
Max TPM: 257.6
Min TPM: 55.8
NK_1
257.6
NK_2
228.4
NK_3
219.1
NK_4
211.7
NK_5
196.3
NK_6
189.5
NK_7
189.4
NK_8
185.7
NK_9
167.3
NK_10
166.4
NK_11
164.4
NK_12
161.6
NK_13
159.1
NK_14
157.2
NK_15
156.8
NK_16
155.8
NK_17
154.4
NK_18
153.0
NK_19
150.9
NK_20
149.7
NK_21
148.6
NK_22
147.8
NK_23
146.3
NK_24
144.2
NK_25
142.0
NK_26
140.0
NK_27
139.5
NK_28
138.9
NK_29
137.2
NK_30
135.3
NK_31
134.8
NK_32
134.7
NK_33
134.4
NK_34
134.1
NK_35
133.9
NK_36
133.6
NK_37
132.9
NK_38
130.4
NK_39
130.3
NK_40
129.8
NK_41
126.9
NK_42
126.9
NK_43
125.5
NK_44
123.4
NK_45
122.4
NK_46
120.0
NK_47
118.8
NK_48
118.7
NK_49
117.2
NK_50
116.2
NK_51
116.2
NK_52
115.7
NK_53
114.9
NK_54
114.8
NK_55
112.5
NK_56
110.6
NK_57
110.1
NK_58
110.0
NK_59
109.7
NK_60
108.8
NK_61
108.2
NK_62
107.1
NK_63
107.0
NK_64
106.1
NK_65
105.6
NK_66
105.0
NK_67
103.9
NK_68
103.8
NK_69
103.2
NK_70
102.0
NK_71
100.6
NK_72
100.6
NK_73
100.5
NK_74
99.5
NK_75
99.0
NK_76
98.2
NK_77
97.8
NK_78
96.5
NK_79
96.1
NK_80
91.3
NK_81
90.3
NK_82
90.1
NK_83
89.6
NK_84
88.6
NK_85
86.5
NK_86
85.0
NK_87
84.8
NK_88
80.5
NK_89
80.3
NK_90
55.8
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.