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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • PFN2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:191.3 nTPM
GTEx:165.7 nTPM
FANTOM5:286.5 Scaled Tags Per Million
Macaque:446.4 nTPM
Pig:420.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.3
Sample id Sample description nTPM
Putamen
nTPM: 191.3
1838 Male, age 80, right hemisphere 234.6
1937 Female, age 91, right hemisphere 223.2
2466 Female, age 79, unknown 197.9
1829 Male, age 74, unknown 191.4
2647 Male, age 75, left hemisphere 184.0
2482 Female, age 94, left hemisphere 183.6
2489 Female, age 72, unknown 124.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

165.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 165.7
Samples: 254

Max nTPM: 299.3
Min nTPM: 80.7
Std nTPM: 42.8
Median nTPM: 160.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 299.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 284.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 280.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 269.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 265.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 261.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 255.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 244.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 238.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 238.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 238.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 236.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 235.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 234.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 234.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 233.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 230.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 229.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 229.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 227.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 225.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 225.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 225.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 224.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 224.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 224.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 223.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 223.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 222.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 221.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 220.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 219.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 219.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 217.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 217.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 215.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 215.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 215.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 214.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 214.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 214.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 213.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 211.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 211.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 210.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 210.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 209.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 208.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 208.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 207.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 206.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 206.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 205.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 205.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 204.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 203.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 203.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 202.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 201.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 200.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 200.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 200.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 199.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 197.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 197.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 197.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 197.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 197.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 196.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 195.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 194.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 193.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 193.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 193.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 191.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 191.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 189.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 185.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 185.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 183.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 183.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 182.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 182.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 182.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 181.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 181.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 181.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 179.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 177.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 177.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 177.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 176.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 176.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 175.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 175.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 174.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 174.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 173.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 173.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 172.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 172.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 172.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 172.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 171.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 171.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 171.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 170.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 169.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 169.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 168.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 168.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 168.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 167.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 166.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 166.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 165.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 163.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 163.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 163.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 162.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 162.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 162.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 161.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 161.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 161.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 161.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 160.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 160.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 160.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 158.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 157.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 156.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 156.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 156.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 155.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 155.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 154.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 154.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 154.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 153.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 153.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 153.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 152.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 152.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 152.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 152.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 152.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 152.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 151.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 151.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 150.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 150.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 149.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 148.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 148.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 147.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 147.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 147.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 147.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 147.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 146.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 146.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 146.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 145.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 145.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 145.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 144.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 144.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 143.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 143.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 143.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 142.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 142.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 142.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 142.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 142.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 142.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 142.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 142.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 142.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 140.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 140.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 140.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 140.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 140.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 139.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 138.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 137.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 136.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 136.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 135.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 135.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 135.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 134.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 134.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 133.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 132.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 132.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 131.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 130.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 129.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 128.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 128.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 126.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 126.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 126.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 126.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 125.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 124.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 124.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 123.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 123.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 123.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 123.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 122.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 121.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 119.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 117.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 117.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 116.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 116.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 116.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 115.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 115.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 115.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 114.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 114.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 113.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 112.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 112.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 112.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 111.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 110.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 108.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 107.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 107.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 107.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 107.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 106.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 105.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 101.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 100.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 99.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 98.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 96.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 95.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 90.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 88.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 88.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 87.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 87.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 81.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 81.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 80.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

286.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 286.5
FF:10176-103C5 60 years, female 286.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

446.4
Macaque sample Sample description nTPM
Putamen
nTPM: 446.4
Samples: 2

Max nTPM: 455.1
Min nTPM: 437.7
Sample A 455.1
Sample B 437.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

420.8
Pig sample Sample description nTPM
Putamen
nTPM: 420.8
Samples: 3

Max nTPM: 563.7
Min nTPM: 323.8
Sample B Female 323.8
Sample C Male 563.7
Sample D Male 374.8

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