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  • TISSUE

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  • PABPC1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:62.4 nTPM
HPA Brain:278.5 nTPM
GTEx:62.4 nTPM
Pig:139.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 125.6
2226 Male, age 75, left hemisphere 127.0
1961 Female, age 42, unknown 124.3
Dorsomedial nucleus
nTPM: 158.4
2017 Female, age 42, unknown 167.8
1989 Male, age 62, unknown 156.2
2041 Female, age 72, unknown 151.2
Lateral hypothalamic area
nTPM: 196.6
2412 Male, age 62, unknown 236.4
2271 Male, age 75, both hemispheres 218.6
2228 Male, age 66, unknown 176.1
1791 Male, age 80, right hemisphere 155.6
Mammillary body
nTPM: 183.4
1834 Female, age 42, unknown 257.4
2413 Male, age 66, unknown 190.7
1945 Male, age 80, right hemisphere 178.2
1948 Female, age 72, unknown 175.6
1923 Female, age 72, unknown 115.0
Paraventricular nucleus
nTPM: 278.5
2700 Male, age 62, unknown 278.5
Preoptic area
nTPM: 146.2
1861 Female, age 42, unknown 194.0
2414 Female, age 72, unknown 165.5
1907 Male, age 80, right hemisphere 79.1
Supraoptic nucleus
nTPM: 258.8
2043 Male, age 62, unknown 305.6
2835 Female, age 72, unknown 272.6
1894 Female, age 72, unknown 198.1
Ventromedial nucleus
nTPM: 122.9
1822 Female, age 42, unknown 127.2
1982 Female, age 72, unknown 118.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 62.4
Samples: 257

Max nTPM: 170.0
Min nTPM: 28.0
Std nTPM: 22.1
Median nTPM: 59.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 170.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 167.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 137.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 126.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 122.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 121.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 119.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 117.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 116.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 111.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 105.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 102.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 102.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 99.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 97.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 97.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 95.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 94.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 94.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 93.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 93.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 93.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 92.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 91.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 91.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 89.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 88.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 87.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 87.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 86.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 86.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 86.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 86.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 85.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 85.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 84.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 84.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 84.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 83.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 83.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 83.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 82.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 81.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 81.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 81.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 81.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 81.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 81.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 80.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 80.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 80.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 78.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 77.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 77.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 77.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 76.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 75.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 74.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 74.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 74.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 74.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 73.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 73.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 73.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 73.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 73.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 72.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 72.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 72.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 72.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 72.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 72.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 72.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 72.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 71.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 71.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 70.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 69.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 69.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 69.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 69.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 68.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 68.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 68.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 68.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 67.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 67.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 67.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 66.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 66.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 66.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 65.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 65.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 65.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 64.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 64.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 64.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 64.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 64.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 63.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 63.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 63.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 63.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 63.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 62.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 62.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 61.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 61.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 61.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 61.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 61.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 61.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 61.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 61.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 60.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 60.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 60.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 59.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 59.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 59.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 59.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 59.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 59.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 59.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 59.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 59.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 59.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 59.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 59.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 59.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 58.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 58.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 57.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 57.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 57.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 57.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 57.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 57.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 57.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 55.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 55.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 55.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 55.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 54.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 54.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 54.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 53.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 53.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 53.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 53.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 53.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 53.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 53.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 52.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 52.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 52.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 52.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 52.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 52.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 52.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 52.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 51.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 51.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 51.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 51.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 51.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 50.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 50.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 50.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 50.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 50.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 49.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 49.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 49.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 49.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 49.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 49.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 49.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 49.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 48.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 48.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 48.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 48.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 48.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 47.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 47.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 47.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 47.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 46.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 46.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 46.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 46.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 46.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 46.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 46.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 45.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 45.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 45.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 45.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 45.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 45.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 44.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 44.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 44.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 44.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 44.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 43.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 43.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 43.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 43.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 43.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 42.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 42.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 42.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 42.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 41.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 41.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 41.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 41.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 41.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 41.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 41.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 41.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 40.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 40.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 40.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 40.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 40.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 40.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 39.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 39.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 39.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 39.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 38.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 38.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 38.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 38.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 38.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 37.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 37.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 37.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 37.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 36.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 35.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 35.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 34.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 34.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 33.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 33.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 32.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 32.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 32.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 32.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 30.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 30.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 28.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 139.8
Samples: 4

Max nTPM: 179.5
Min nTPM: 104.7
Sample A Female 179.5
Sample B Female 140.0
Sample C Male 134.8
Sample D Male 104.7

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