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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • MAP4K4
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:216.4 nTPM
GTEx:152.2 nTPM
FANTOM5:100.6 Scaled Tags Per Million
Macaque:90.8 nTPM
Pig:119.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

216.4
Sample id Sample description nTPM
Putamen
nTPM: 216.4
2647 Male, age 75, left hemisphere 350.2
2489 Female, age 72, unknown 305.1
1829 Male, age 74, unknown 261.7
2482 Female, age 94, left hemisphere 216.5
1937 Female, age 91, right hemisphere 156.9
2466 Female, age 79, unknown 138.5
1838 Male, age 80, right hemisphere 85.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 152.2
Samples: 254

Max nTPM: 603.5
Min nTPM: 25.6
Std nTPM: 99.4
Median nTPM: 132.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 603.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 564.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 539.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 528.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 510.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 456.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 442.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 413.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 411.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 405.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 386.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 384.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 370.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 362.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 352.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 323.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 312.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 309.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 298.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 284.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 280.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 277.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 277.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 274.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 272.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 271.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 264.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 258.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 258.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 257.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 249.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 246.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 246.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 244.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 243.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 240.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 239.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 239.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 235.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 233.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 226.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 224.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 223.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 222.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 218.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 218.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 216.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 214.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 211.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 209.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 208.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 207.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 204.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 201.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 199.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 194.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 193.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 190.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 190.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 184.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 183.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 181.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 181.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 177.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 175.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 175.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 174.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 174.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 174.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 172.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 172.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 172.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 171.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 170.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 170.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 168.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 168.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 168.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 168.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 167.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 167.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 164.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 163.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 162.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 159.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 158.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 158.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 158.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 158.4
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 157.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 157.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 155.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 155.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 155.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 152.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 152.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 151.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 151.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 150.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 148.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 148.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 146.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 145.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 145.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 144.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 144.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 144.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 143.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 143.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 143.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 142.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 142.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 142.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 142.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 139.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 139.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 138.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 137.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 137.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 136.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 136.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 136.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 136.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 135.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 134.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 134.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 133.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 131.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 130.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 128.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 128.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 127.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 127.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 126.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 126.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 125.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 124.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 123.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 122.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 122.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 122.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 120.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 120.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 119.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 118.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 118.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 118.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 118.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 118.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 117.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 116.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 115.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 113.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 113.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 112.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 112.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 111.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 111.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 110.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 109.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 108.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 108.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 107.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 105.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 105.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 105.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 104.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 104.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 104.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 104.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 102.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 101.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 101.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 100.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 99.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 99.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 97.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 95.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 95.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 93.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 92.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 92.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 92.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 91.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 89.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 89.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 88.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 86.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 86.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 85.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 84.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 84.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 84.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 83.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 82.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 81.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 80.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 79.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 78.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 75.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 74.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 74.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 74.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 73.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 73.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 73.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 71.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 70.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 70.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 69.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 69.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 67.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 66.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 66.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 65.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 64.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 64.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 63.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 62.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 62.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 61.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 59.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 59.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 59.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 59.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 57.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 56.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 56.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 55.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 51.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 50.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 50.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 50.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 50.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 49.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 49.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 49.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 48.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 48.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 48.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 48.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 47.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 47.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 46.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 44.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 41.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 40.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 40.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 37.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 37.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 35.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 35.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 33.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 25.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

100.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 100.6
FF:10176-103C5 60 years, female 100.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.8
Macaque sample Sample description nTPM
Putamen
nTPM: 90.8
Samples: 2

Max nTPM: 93.6
Min nTPM: 88.0
Sample A 88.0
Sample B 93.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.6
Pig sample Sample description nTPM
Putamen
nTPM: 119.6
Samples: 3

Max nTPM: 153.5
Min nTPM: 96.3
Sample B Female 96.3
Sample C Male 109.1
Sample D Male 153.5

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