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IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:73.0 nTPM
Monaco:74.3 nTPM
Schmiedel:23.9 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

73.0
HPA sample nTPM
Classical monocyte
nTPM: 64.1
Samples: 6

Max nTPM: 81.9
Min nTPM: 46.3
P10809_1003 46.3
P10809_1020 74.9
P10809_1039 81.9
P10809_1058 51.4
P10809_1080 61.9
P10809_1107 68.3
Intermediate monocyte
nTPM: 73.0
Samples: 6

Max nTPM: 90.8
Min nTPM: 52.9
P10809_1004 54.8
P10809_1023 90.8
P10809_1042 81.4
P10809_1061 52.9
P10809_1081 67.9
P10809_1108 90.3
Non-classical monocyte
nTPM: 68.7
Samples: 5

Max nTPM: 80.2
Min nTPM: 46.7
P10809_1005 46.7
P10809_1053 74.9
P10809_1072 76.0
P10809_1082 65.7
P10809_1109 80.2

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

74.3
Monaco sample nTPM
Classical monocyte
nTPM: 74.4
Samples: 4

Max nTPM: 94.2
Min nTPM: 57.5
RHH5313_R3680 64.7
RHH5221_R3593 57.5
RHH5250_R3622 94.2
RHH5279_R3651 81.0
Intermediate monocyte
nTPM: 67.3
Samples: 4

Max nTPM: 89.8
Min nTPM: 47.3
RHH5314_R3681 74.9
RHH5222_R3594 47.3
RHH5251_R3623 57.2
RHH5280_R3652 89.8
Non-classical monocyte
nTPM: 58.3
Samples: 4

Max nTPM: 69.9
Min nTPM: 45.8
RHH5315_R3682 58.9
RHH5223_R3595 45.8
RHH5252_R3624 58.6
RHH5281_R3653 69.9

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

23.9
Schmiedel sample id TPM
Classical monocyte
TPM: 23.9
Samples: 91

Max TPM: 32.8
Min TPM: 14.3
MONOCYTES_1 32.8
MONOCYTES_2 32.3
MONOCYTES_3 31.8
MONOCYTES_4 31.1
MONOCYTES_5 30.8
MONOCYTES_6 30.7
MONOCYTES_7 30.2
MONOCYTES_8 29.7
MONOCYTES_9 29.3
MONOCYTES_10 29.3
MONOCYTES_11 28.8
MONOCYTES_12 28.7
MONOCYTES_13 28.6
MONOCYTES_14 28.4
MONOCYTES_15 27.9
MONOCYTES_16 27.9
MONOCYTES_17 27.8
MONOCYTES_18 27.8
MONOCYTES_19 27.7
MONOCYTES_20 27.6
MONOCYTES_21 27.3
MONOCYTES_22 27.2
MONOCYTES_23 27.1
MONOCYTES_24 26.9
MONOCYTES_25 26.8
MONOCYTES_26 26.0
MONOCYTES_27 25.8
MONOCYTES_28 25.5
MONOCYTES_29 25.3
MONOCYTES_30 25.2
MONOCYTES_31 25.2
MONOCYTES_32 25.2
MONOCYTES_33 25.0
MONOCYTES_34 25.0
MONOCYTES_35 25.0
MONOCYTES_36 24.9
MONOCYTES_37 24.8
MONOCYTES_38 24.1
MONOCYTES_39 23.9
MONOCYTES_40 23.9
MONOCYTES_41 23.9
MONOCYTES_42 23.9
MONOCYTES_43 23.8
MONOCYTES_44 23.7
MONOCYTES_45 23.6
MONOCYTES_46 23.6
MONOCYTES_47 23.6
MONOCYTES_48 23.5
MONOCYTES_49 23.4
MONOCYTES_50 23.3
MONOCYTES_51 23.3
MONOCYTES_52 23.2
MONOCYTES_53 23.2
MONOCYTES_54 23.2
MONOCYTES_55 22.6
MONOCYTES_56 22.6
MONOCYTES_57 22.5
MONOCYTES_58 22.2
MONOCYTES_59 22.1
MONOCYTES_60 21.9
MONOCYTES_61 21.8
MONOCYTES_62 21.4
MONOCYTES_63 21.4
MONOCYTES_64 21.4
MONOCYTES_65 21.3
MONOCYTES_66 21.1
MONOCYTES_67 21.1
MONOCYTES_68 21.1
MONOCYTES_69 21.0
MONOCYTES_70 21.0
MONOCYTES_71 20.7
MONOCYTES_72 20.6
MONOCYTES_73 20.5
MONOCYTES_74 20.4
MONOCYTES_75 20.2
MONOCYTES_76 20.1
MONOCYTES_77 19.9
MONOCYTES_78 19.8
MONOCYTES_79 19.6
MONOCYTES_80 19.5
MONOCYTES_81 19.5
MONOCYTES_82 19.3
MONOCYTES_83 19.2
MONOCYTES_84 19.2
MONOCYTES_85 19.1
MONOCYTES_86 18.2
MONOCYTES_87 18.2
MONOCYTES_88 17.8
MONOCYTES_89 16.7
MONOCYTES_90 16.5
MONOCYTES_91 14.3
Show allShow less
Non-classical monocyte
TPM: 22.8
Samples: 90

Max TPM: 31.5
Min TPM: 12.4
M2_1 31.5
M2_2 31.2
M2_3 30.7
M2_4 29.9
M2_5 28.8
M2_6 28.5
M2_7 28.3
M2_8 28.0
M2_9 27.9
M2_10 26.8
M2_11 26.6
M2_12 26.5
M2_13 26.5
M2_14 26.4
M2_15 26.4
M2_16 26.3
M2_17 26.3
M2_18 26.1
M2_19 26.1
M2_20 26.0
M2_21 25.8
M2_22 25.8
M2_23 25.7
M2_24 25.6
M2_25 25.4
M2_26 25.3
M2_27 25.2
M2_28 24.9
M2_29 24.8
M2_30 24.7
M2_31 24.6
M2_32 24.6
M2_33 24.5
M2_34 24.4
M2_35 24.1
M2_36 23.9
M2_37 23.4
M2_38 23.3
M2_39 23.3
M2_40 23.2
M2_41 23.2
M2_42 23.1
M2_43 22.9
M2_44 22.9
M2_45 22.7
M2_46 22.7
M2_47 22.7
M2_48 22.6
M2_49 22.5
M2_50 22.4
M2_51 22.2
M2_52 22.2
M2_53 21.9
M2_54 21.9
M2_55 21.8
M2_56 21.5
M2_57 21.4
M2_58 21.3
M2_59 21.3
M2_60 20.9
M2_61 20.9
M2_62 20.8
M2_63 20.8
M2_64 20.7
M2_65 20.7
M2_66 20.5
M2_67 20.4
M2_68 20.4
M2_69 20.4
M2_70 20.3
M2_71 20.3
M2_72 20.3
M2_73 19.3
M2_74 18.9
M2_75 18.6
M2_76 18.5
M2_77 18.4
M2_78 18.3
M2_79 18.1
M2_80 17.9
M2_81 17.8
M2_82 17.8
M2_83 17.3
M2_84 17.2
M2_85 16.9
M2_86 16.6
M2_87 16.2
M2_88 15.9
M2_89 13.9
M2_90 12.4
Show allShow less

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