General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.
Gene namei
Official gene symbol, which is typically a short form of the gene name, according to HGNC.
Assigned HPA protein class(es) for the encoded protein(s).
Cancer-related genes Disease related genes Housekeeping proteins Human disease related genes Plasma proteins Transcription factors
Predicted locationi
All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.
Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).
The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.
Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.
Chromosome
19
Cytoband
p13.3
Chromosome location (bp)
1609291 - 1652615
Number of transcriptsi
Number of protein-coding transcripts from the gene as defined by Ensembl.
Useful information about the protein provided by UniProt.
Transcriptional regulator involved in the initiation of neuronal differentiation and mesenchymal to epithelial transition (By similarity). Heterodimers between TCF3 and tissue-specific basic helix-loop-helix (bHLH) proteins play major roles in determining tissue-specific cell fate during embryogenesis, like muscle or early B-cell differentiation (By similarity). Together with TCF15, required for the mesenchymal to epithelial transition (By similarity). Dimers bind DNA on E-box motifs: 5'-CANNTG-3' (By similarity). Binds to the kappa-E2 site in the kappa immunoglobulin gene enhancer 1. Binds to IEB1 and IEB2, which are short DNA sequences in the insulin gene transcription control region (By similarity)....show less
Molecular function (UniProt)i
Keywords assigned by UniProt to proteins due to their particular molecular function.
DNA-binding
Biological process (UniProt)i
Keywords assigned by UniProt to proteins because they are involved in a particular biological process.
This gene encodes a member of the E protein (class I) family of helix-loop-helix transcription factors. E proteins activate transcription by binding to regulatory E-box sequences on target genes as heterodimers or homodimers, and are inhibited by heterodimerization with inhibitor of DNA-binding (class IV) helix-loop-helix proteins. E proteins play a critical role in lymphopoiesis, and the encoded protein is required for B and T lymphocyte development. Deletion of this gene or diminished activity of the encoded protein may play a role in lymphoid malignancies. This gene is also involved in several chromosomal translocations that are associated with lymphoid malignancies including pre-B-cell acute lymphoblastic leukemia (t(1;19), with PBX1), childhood leukemia (t(19;19), with TFPT) and acute leukemia (t(12;19), with ZNF384). Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 9. [provided by RefSeq, Sep 2011]...show less
The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.
The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.
The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.
The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC Plasma proteins Transcription factors Basic domains CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Disease related genes Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Mapped to neXtProt neXtProt - Evidence at protein level Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014)
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GO:0000122[negative regulation of transcription by RNA polymerase II] GO:0000785[chromatin] GO:0000791[euchromatin] GO:0000976[transcription cis-regulatory region binding] GO:0000978[RNA polymerase II cis-regulatory region sequence-specific DNA binding] GO:0000981[DNA-binding transcription factor activity, RNA polymerase II-specific] GO:0000987[cis-regulatory region sequence-specific DNA binding] GO:0001227[DNA-binding transcription repressor activity, RNA polymerase II-specific] GO:0001228[DNA-binding transcription activator activity, RNA polymerase II-specific] GO:0002326[B cell lineage commitment] GO:0003677[DNA binding] GO:0003700[DNA-binding transcription factor activity] GO:0005515[protein binding] GO:0005634[nucleus] GO:0005654[nucleoplasm] GO:0005667[transcription regulator complex] GO:0005737[cytoplasm] GO:0006355[regulation of DNA-templated transcription] GO:0006357[regulation of transcription by RNA polymerase II] GO:0007399[nervous system development] GO:0030154[cell differentiation] GO:0030183[B cell differentiation] GO:0031435[mitogen-activated protein kinase kinase kinase binding] GO:0033152[immunoglobulin V(D)J recombination] GO:0042803[protein homodimerization activity] GO:0043425[bHLH transcription factor binding] GO:0045666[positive regulation of neuron differentiation] GO:0045893[positive regulation of DNA-templated transcription] GO:0045944[positive regulation of transcription by RNA polymerase II] GO:0046982[protein heterodimerization activity] GO:0046983[protein dimerization activity] GO:0051091[positive regulation of DNA-binding transcription factor activity] GO:0061629[RNA polymerase II-specific DNA-binding transcription factor binding] GO:0070644[vitamin D response element binding] GO:0070888[E-box binding] GO:0090575[RNA polymerase II transcription regulator complex] GO:0140297[DNA-binding transcription factor binding]
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines MEMSAT-SVM predicted membrane proteins Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC Plasma proteins Transcription factors Basic domains CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Disease related genes Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Mapped to neXtProt neXtProt - Evidence at protein level Protein evidence (Ezkurdia et al 2014)
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GO:0000122[negative regulation of transcription by RNA polymerase II] GO:0000785[chromatin] GO:0000791[euchromatin] GO:0000978[RNA polymerase II cis-regulatory region sequence-specific DNA binding] GO:0000981[DNA-binding transcription factor activity, RNA polymerase II-specific] GO:0000987[cis-regulatory region sequence-specific DNA binding] GO:0001227[DNA-binding transcription repressor activity, RNA polymerase II-specific] GO:0001228[DNA-binding transcription activator activity, RNA polymerase II-specific] GO:0002326[B cell lineage commitment] GO:0003677[DNA binding] GO:0003700[DNA-binding transcription factor activity] GO:0005515[protein binding] GO:0005634[nucleus] GO:0005654[nucleoplasm] GO:0005667[transcription regulator complex] GO:0005737[cytoplasm] GO:0006355[regulation of DNA-templated transcription] GO:0006357[regulation of transcription by RNA polymerase II] GO:0007399[nervous system development] GO:0030154[cell differentiation] GO:0030183[B cell differentiation] GO:0031435[mitogen-activated protein kinase kinase kinase binding] GO:0033152[immunoglobulin V(D)J recombination] GO:0042803[protein homodimerization activity] GO:0043425[bHLH transcription factor binding] GO:0045666[positive regulation of neuron differentiation] GO:0045893[positive regulation of DNA-templated transcription] GO:0045944[positive regulation of transcription by RNA polymerase II] GO:0046982[protein heterodimerization activity] GO:0046983[protein dimerization activity] GO:0051091[positive regulation of DNA-binding transcription factor activity] GO:0061629[RNA polymerase II-specific DNA-binding transcription factor binding] GO:0070644[vitamin D response element binding] GO:0070888[E-box binding] GO:0090575[RNA polymerase II transcription regulator complex] GO:0140297[DNA-binding transcription factor binding]
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC Plasma proteins Transcription factors Basic domains CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Disease related genes Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Mapped to neXtProt neXtProt - Evidence at protein level Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122[negative regulation of transcription by RNA polymerase II] GO:0000785[chromatin] GO:0000791[euchromatin] GO:0000976[transcription cis-regulatory region binding] GO:0000978[RNA polymerase II cis-regulatory region sequence-specific DNA binding] GO:0000981[DNA-binding transcription factor activity, RNA polymerase II-specific] GO:0000987[cis-regulatory region sequence-specific DNA binding] GO:0001227[DNA-binding transcription repressor activity, RNA polymerase II-specific] GO:0001228[DNA-binding transcription activator activity, RNA polymerase II-specific] GO:0002326[B cell lineage commitment] GO:0003677[DNA binding] GO:0003700[DNA-binding transcription factor activity] GO:0005515[protein binding] GO:0005634[nucleus] GO:0005654[nucleoplasm] GO:0005667[transcription regulator complex] GO:0005737[cytoplasm] GO:0006355[regulation of DNA-templated transcription] GO:0006357[regulation of transcription by RNA polymerase II] GO:0007399[nervous system development] GO:0030154[cell differentiation] GO:0030183[B cell differentiation] GO:0030890[positive regulation of B cell proliferation] GO:0031435[mitogen-activated protein kinase kinase kinase binding] GO:0032991[protein-containing complex] GO:0033152[immunoglobulin V(D)J recombination] GO:0042803[protein homodimerization activity] GO:0043425[bHLH transcription factor binding] GO:0045666[positive regulation of neuron differentiation] GO:0045787[positive regulation of cell cycle] GO:0045893[positive regulation of DNA-templated transcription] GO:0045944[positive regulation of transcription by RNA polymerase II] GO:0046982[protein heterodimerization activity] GO:0046983[protein dimerization activity] GO:0051091[positive regulation of DNA-binding transcription factor activity] GO:0061629[RNA polymerase II-specific DNA-binding transcription factor binding] GO:0070644[vitamin D response element binding] GO:0070888[E-box binding] GO:0090575[RNA polymerase II transcription regulator complex] GO:0140297[DNA-binding transcription factor binding] GO:2000045[regulation of G1/S transition of mitotic cell cycle]
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines SCAMPI predicted membrane proteins Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
Housekeeping proteins Housekeeping in single cell types Housekeeping in tissues Housekeeping in single nuclei brain Housekeeping in cell lines Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC CollecTRI - Gene Regulatory Network Cancer-related genes COSMIC somatic mutations in cancer genes COSMIC Somatic Mutations COSMIC Translocations Human disease related genes Cancers Cancers of haematopoietic and lymphoid tissues Immune system diseases Primary immunodeficiency Protein evidence (Ezkurdia et al 2014)
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