A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.2
nTPM
Monaco:
104.8
nTPM
Schmiedel:
32.6
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
21.2
HPA sample
nTPM
Classical monocyte nTPM: 21.2
Samples: 6
Max nTPM: 32.1
Min nTPM: 16.6
P10809_1003
32.1
P10809_1020
21.1
P10809_1039
20.3
P10809_1058
16.6
P10809_1080
17.2
P10809_1107
19.7
Intermediate monocyte nTPM: 18.3
Samples: 6
Max nTPM: 21.3
Min nTPM: 14.8
P10809_1004
21.3
P10809_1023
15.4
P10809_1042
20.1
P10809_1061
18.4
P10809_1081
14.8
P10809_1108
20.1
Non-classical monocyte nTPM: 20.8
Samples: 5
Max nTPM: 44.0
Min nTPM: 13.4
P10809_1005
15.4
P10809_1053
15.7
P10809_1072
44.0
P10809_1082
13.4
P10809_1109
15.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
104.8
Monaco sample
nTPM
Classical monocyte nTPM: 104.8
Samples: 4
Max nTPM: 129.3
Min nTPM: 86.7
RHH5313_R3680
86.7
RHH5221_R3593
104.2
RHH5250_R3622
129.3
RHH5279_R3651
99.0
Intermediate monocyte nTPM: 71.6
Samples: 4
Max nTPM: 108.7
Min nTPM: 51.9
RHH5314_R3681
70.7
RHH5222_R3594
51.9
RHH5251_R3623
55.1
RHH5280_R3652
108.7
Non-classical monocyte nTPM: 66.0
Samples: 4
Max nTPM: 87.7
Min nTPM: 52.2
RHH5315_R3682
55.3
RHH5223_R3595
52.2
RHH5252_R3624
68.8
RHH5281_R3653
87.7
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
32.6
Schmiedel sample id
TPM
Classical monocyte TPM: 32.6
Samples: 91
Max TPM: 43.6
Min TPM: 22.8
MONOCYTES_1
43.6
MONOCYTES_2
42.7
MONOCYTES_3
42.5
MONOCYTES_4
42.4
MONOCYTES_5
40.9
MONOCYTES_6
40.6
MONOCYTES_7
39.8
MONOCYTES_8
39.6
MONOCYTES_9
39.5
MONOCYTES_10
38.5
MONOCYTES_11
38.4
MONOCYTES_12
38.4
MONOCYTES_13
38.3
MONOCYTES_14
38.0
MONOCYTES_15
37.3
MONOCYTES_16
37.2
MONOCYTES_17
37.2
MONOCYTES_18
36.8
MONOCYTES_19
36.7
MONOCYTES_20
36.7
MONOCYTES_21
36.6
MONOCYTES_22
36.6
MONOCYTES_23
36.4
MONOCYTES_24
35.8
MONOCYTES_25
35.8
MONOCYTES_26
35.7
MONOCYTES_27
35.6
MONOCYTES_28
35.6
MONOCYTES_29
35.1
MONOCYTES_30
34.9
MONOCYTES_31
34.9
MONOCYTES_32
34.5
MONOCYTES_33
34.5
MONOCYTES_34
34.3
MONOCYTES_35
34.3
MONOCYTES_36
34.2
MONOCYTES_37
34.2
MONOCYTES_38
33.8
MONOCYTES_39
33.6
MONOCYTES_40
33.6
MONOCYTES_41
33.6
MONOCYTES_42
33.3
MONOCYTES_43
33.2
MONOCYTES_44
32.7
MONOCYTES_45
32.7
MONOCYTES_46
32.6
MONOCYTES_47
32.3
MONOCYTES_48
32.1
MONOCYTES_49
31.9
MONOCYTES_50
31.9
MONOCYTES_51
31.4
MONOCYTES_52
31.4
MONOCYTES_53
31.4
MONOCYTES_54
31.3
MONOCYTES_55
31.2
MONOCYTES_56
31.1
MONOCYTES_57
31.0
MONOCYTES_58
30.9
MONOCYTES_59
30.6
MONOCYTES_60
30.6
MONOCYTES_61
30.3
MONOCYTES_62
30.2
MONOCYTES_63
30.1
MONOCYTES_64
30.1
MONOCYTES_65
29.7
MONOCYTES_66
29.6
MONOCYTES_67
29.2
MONOCYTES_68
29.0
MONOCYTES_69
28.9
MONOCYTES_70
28.9
MONOCYTES_71
28.8
MONOCYTES_72
28.5
MONOCYTES_73
28.4
MONOCYTES_74
28.3
MONOCYTES_75
27.7
MONOCYTES_76
27.3
MONOCYTES_77
27.1
MONOCYTES_78
26.8
MONOCYTES_79
26.6
MONOCYTES_80
26.5
MONOCYTES_81
26.4
MONOCYTES_82
25.7
MONOCYTES_83
25.4
MONOCYTES_84
25.4
MONOCYTES_85
25.3
MONOCYTES_86
25.2
MONOCYTES_87
25.0
MONOCYTES_88
24.7
MONOCYTES_89
24.6
MONOCYTES_90
24.6
MONOCYTES_91
22.8
Show allShow less
Non-classical monocyte TPM: 32.6
Samples: 90
Max TPM: 43.9
Min TPM: 22.4
M2_1
43.9
M2_2
43.7
M2_3
42.2
M2_4
40.9
M2_5
40.4
M2_6
40.3
M2_7
40.0
M2_8
39.2
M2_9
39.1
M2_10
38.2
M2_11
38.0
M2_12
37.9
M2_13
37.9
M2_14
36.9
M2_15
36.7
M2_16
36.7
M2_17
36.6
M2_18
35.9
M2_19
35.6
M2_20
35.4
M2_21
35.1
M2_22
35.0
M2_23
34.9
M2_24
34.5
M2_25
34.4
M2_26
34.3
M2_27
34.3
M2_28
34.3
M2_29
34.2
M2_30
33.9
M2_31
33.9
M2_32
33.9
M2_33
33.8
M2_34
33.8
M2_35
33.7
M2_36
33.4
M2_37
33.3
M2_38
33.2
M2_39
33.1
M2_40
32.7
M2_41
32.5
M2_42
32.3
M2_43
32.3
M2_44
32.2
M2_45
32.1
M2_46
32.0
M2_47
32.0
M2_48
31.9
M2_49
31.8
M2_50
31.7
M2_51
31.7
M2_52
31.5
M2_53
31.5
M2_54
31.2
M2_55
31.2
M2_56
31.2
M2_57
31.1
M2_58
30.9
M2_59
30.8
M2_60
30.6
M2_61
30.6
M2_62
30.6
M2_63
30.5
M2_64
30.4
M2_65
30.4
M2_66
30.2
M2_67
30.2
M2_68
30.1
M2_69
29.8
M2_70
29.8
M2_71
29.4
M2_72
29.0
M2_73
28.9
M2_74
28.7
M2_75
28.7
M2_76
28.3
M2_77
28.1
M2_78
28.0
M2_79
27.9
M2_80
27.8
M2_81
27.4
M2_82
27.2
M2_83
26.5
M2_84
26.5
M2_85
25.9
M2_86
25.7
M2_87
25.6
M2_88
25.6
M2_89
25.2
M2_90
22.4
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
