A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.6
nTPM
Monaco:
120.8
nTPM
Schmiedel:
19.1
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
31.6
HPA sample
nTPM
Classical monocyte nTPM: 25.6
Samples: 6
Max nTPM: 33.5
Min nTPM: 18.4
P10809_1003
33.5
P10809_1020
31.9
P10809_1039
20.1
P10809_1058
18.4
P10809_1080
25.4
P10809_1107
24.3
Intermediate monocyte nTPM: 29.6
Samples: 6
Max nTPM: 37.2
Min nTPM: 21.9
P10809_1004
34.4
P10809_1023
34.9
P10809_1042
26.9
P10809_1061
37.2
P10809_1081
21.9
P10809_1108
22.4
Non-classical monocyte nTPM: 31.6
Samples: 5
Max nTPM: 61.2
Min nTPM: 14.5
P10809_1005
37.0
P10809_1053
26.1
P10809_1072
61.2
P10809_1082
14.5
P10809_1109
19.4
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
120.8
Monaco sample
nTPM
Classical monocyte nTPM: 112.6
Samples: 4
Max nTPM: 129.3
Min nTPM: 100.8
RHH5313_R3680
115.3
RHH5221_R3593
129.3
RHH5250_R3622
104.8
RHH5279_R3651
100.8
Intermediate monocyte nTPM: 115.8
Samples: 4
Max nTPM: 137.8
Min nTPM: 97.3
RHH5314_R3681
112.2
RHH5222_R3594
137.8
RHH5251_R3623
116.0
RHH5280_R3652
97.3
Non-classical monocyte nTPM: 120.8
Samples: 4
Max nTPM: 129.6
Min nTPM: 105.8
RHH5315_R3682
119.6
RHH5223_R3595
128.1
RHH5252_R3624
105.8
RHH5281_R3653
129.6
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
19.1
Schmiedel sample id
TPM
Classical monocyte TPM: 14.9
Samples: 91
Max TPM: 18.4
Min TPM: 10.5
MONOCYTES_1
18.4
MONOCYTES_2
18.4
MONOCYTES_3
18.3
MONOCYTES_4
17.8
MONOCYTES_5
17.6
MONOCYTES_6
17.5
MONOCYTES_7
17.2
MONOCYTES_8
17.1
MONOCYTES_9
17.0
MONOCYTES_10
17.0
MONOCYTES_11
16.7
MONOCYTES_12
16.6
MONOCYTES_13
16.5
MONOCYTES_14
16.5
MONOCYTES_15
16.5
MONOCYTES_16
16.4
MONOCYTES_17
16.4
MONOCYTES_18
16.4
MONOCYTES_19
16.3
MONOCYTES_20
16.3
MONOCYTES_21
16.2
MONOCYTES_22
16.2
MONOCYTES_23
16.1
MONOCYTES_24
16.1
MONOCYTES_25
16.1
MONOCYTES_26
15.9
MONOCYTES_27
15.9
MONOCYTES_28
15.8
MONOCYTES_29
15.8
MONOCYTES_30
15.8
MONOCYTES_31
15.8
MONOCYTES_32
15.8
MONOCYTES_33
15.7
MONOCYTES_34
15.7
MONOCYTES_35
15.6
MONOCYTES_36
15.6
MONOCYTES_37
15.5
MONOCYTES_38
15.5
MONOCYTES_39
15.4
MONOCYTES_40
15.4
MONOCYTES_41
15.3
MONOCYTES_42
15.3
MONOCYTES_43
15.2
MONOCYTES_44
15.2
MONOCYTES_45
15.1
MONOCYTES_46
15.1
MONOCYTES_47
15.1
MONOCYTES_48
15.1
MONOCYTES_49
15.0
MONOCYTES_50
15.0
MONOCYTES_51
14.8
MONOCYTES_52
14.7
MONOCYTES_53
14.7
MONOCYTES_54
14.7
MONOCYTES_55
14.6
MONOCYTES_56
14.6
MONOCYTES_57
14.6
MONOCYTES_58
14.5
MONOCYTES_59
14.4
MONOCYTES_60
14.4
MONOCYTES_61
14.4
MONOCYTES_62
14.3
MONOCYTES_63
14.2
MONOCYTES_64
14.2
MONOCYTES_65
14.1
MONOCYTES_66
14.1
MONOCYTES_67
14.0
MONOCYTES_68
13.9
MONOCYTES_69
13.9
MONOCYTES_70
13.8
MONOCYTES_71
13.8
MONOCYTES_72
13.6
MONOCYTES_73
13.6
MONOCYTES_74
13.5
MONOCYTES_75
13.5
MONOCYTES_76
13.4
MONOCYTES_77
13.4
MONOCYTES_78
13.0
MONOCYTES_79
13.0
MONOCYTES_80
13.0
MONOCYTES_81
12.7
MONOCYTES_82
12.4
MONOCYTES_83
12.2
MONOCYTES_84
11.9
MONOCYTES_85
11.8
MONOCYTES_86
11.8
MONOCYTES_87
11.2
MONOCYTES_88
11.1
MONOCYTES_89
10.9
MONOCYTES_90
10.9
MONOCYTES_91
10.5
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Non-classical monocyte TPM: 19.1
Samples: 90
Max TPM: 23.6
Min TPM: 12.9
M2_1
23.6
M2_2
23.0
M2_3
22.6
M2_4
22.6
M2_5
22.5
M2_6
22.3
M2_7
22.1
M2_8
22.1
M2_9
22.1
M2_10
22.0
M2_11
21.9
M2_12
21.7
M2_13
21.7
M2_14
21.5
M2_15
21.4
M2_16
21.4
M2_17
21.2
M2_18
21.1
M2_19
21.0
M2_20
20.9
M2_21
20.8
M2_22
20.8
M2_23
20.5
M2_24
20.5
M2_25
20.4
M2_26
20.4
M2_27
20.3
M2_28
20.3
M2_29
20.2
M2_30
20.1
M2_31
20.0
M2_32
20.0
M2_33
20.0
M2_34
20.0
M2_35
20.0
M2_36
19.9
M2_37
19.9
M2_38
19.6
M2_39
19.6
M2_40
19.6
M2_41
19.5
M2_42
19.4
M2_43
19.4
M2_44
19.3
M2_45
19.2
M2_46
19.2
M2_47
19.1
M2_48
19.1
M2_49
19.1
M2_50
19.0
M2_51
19.0
M2_52
19.0
M2_53
19.0
M2_54
18.9
M2_55
18.8
M2_56
18.8
M2_57
18.8
M2_58
18.8
M2_59
18.7
M2_60
18.6
M2_61
18.6
M2_62
18.3
M2_63
18.2
M2_64
18.1
M2_65
18.0
M2_66
17.9
M2_67
17.9
M2_68
17.8
M2_69
17.6
M2_70
17.5
M2_71
17.5
M2_72
17.4
M2_73
17.4
M2_74
17.4
M2_75
17.3
M2_76
17.3
M2_77
16.4
M2_78
16.2
M2_79
16.0
M2_80
15.8
M2_81
15.7
M2_82
15.5
M2_83
15.4
M2_84
15.0
M2_85
14.8
M2_86
14.5
M2_87
14.4
M2_88
13.8
M2_89
13.8
M2_90
12.9
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