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BETA
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  • AP1M1
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:237.1 nTPM
Monaco:334.2 nTPM
Schmiedel:25.7 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

237.1
HPA sample nTPM
Classical monocyte
nTPM: 142.6
Samples: 6

Max nTPM: 162.3
Min nTPM: 103.9
P10809_1003 156.6
P10809_1020 162.3
P10809_1039 158.5
P10809_1058 103.9
P10809_1080 139.4
P10809_1107 134.8
Intermediate monocyte
nTPM: 181.0
Samples: 6

Max nTPM: 205.2
Min nTPM: 129.6
P10809_1004 190.2
P10809_1023 205.2
P10809_1042 192.4
P10809_1061 199.3
P10809_1081 129.6
P10809_1108 169.1
Non-classical monocyte
nTPM: 237.1
Samples: 5

Max nTPM: 357.8
Min nTPM: 128.0
P10809_1005 218.4
P10809_1053 271.3
P10809_1072 357.8
P10809_1082 128.0
P10809_1109 209.9

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

334.2
Monaco sample nTPM
Classical monocyte
nTPM: 244.0
Samples: 4

Max nTPM: 260.9
Min nTPM: 232.1
RHH5313_R3680 232.1
RHH5221_R3593 242.6
RHH5250_R3622 260.9
RHH5279_R3651 240.4
Intermediate monocyte
nTPM: 266.7
Samples: 4

Max nTPM: 288.2
Min nTPM: 249.6
RHH5314_R3681 271.6
RHH5222_R3594 288.2
RHH5251_R3623 249.6
RHH5280_R3652 257.4
Non-classical monocyte
nTPM: 334.3
Samples: 4

Max nTPM: 364.7
Min nTPM: 321.4
RHH5315_R3682 322.3
RHH5223_R3595 328.6
RHH5252_R3624 364.7
RHH5281_R3653 321.4

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

25.7
Schmiedel sample id TPM
Classical monocyte
TPM: 15.6
Samples: 91

Max TPM: 22.2
Min TPM: 8.9
MONOCYTES_1 22.2
MONOCYTES_2 21.6
MONOCYTES_3 21.5
MONOCYTES_4 21.4
MONOCYTES_5 21.3
MONOCYTES_6 21.2
MONOCYTES_7 21.0
MONOCYTES_8 20.6
MONOCYTES_9 20.6
MONOCYTES_10 20.2
MONOCYTES_11 20.1
MONOCYTES_12 19.9
MONOCYTES_13 19.7
MONOCYTES_14 19.5
MONOCYTES_15 19.2
MONOCYTES_16 18.7
MONOCYTES_17 18.5
MONOCYTES_18 18.4
MONOCYTES_19 18.3
MONOCYTES_20 18.2
MONOCYTES_21 18.2
MONOCYTES_22 18.1
MONOCYTES_23 18.1
MONOCYTES_24 18.0
MONOCYTES_25 18.0
MONOCYTES_26 17.9
MONOCYTES_27 17.8
MONOCYTES_28 17.8
MONOCYTES_29 17.7
MONOCYTES_30 17.7
MONOCYTES_31 17.5
MONOCYTES_32 17.4
MONOCYTES_33 17.1
MONOCYTES_34 17.0
MONOCYTES_35 16.9
MONOCYTES_36 16.6
MONOCYTES_37 16.4
MONOCYTES_38 16.3
MONOCYTES_39 16.2
MONOCYTES_40 16.0
MONOCYTES_41 15.6
MONOCYTES_42 15.5
MONOCYTES_43 15.5
MONOCYTES_44 15.5
MONOCYTES_45 15.4
MONOCYTES_46 15.4
MONOCYTES_47 15.3
MONOCYTES_48 15.3
MONOCYTES_49 15.3
MONOCYTES_50 15.2
MONOCYTES_51 15.2
MONOCYTES_52 14.9
MONOCYTES_53 14.9
MONOCYTES_54 14.9
MONOCYTES_55 14.6
MONOCYTES_56 14.4
MONOCYTES_57 14.3
MONOCYTES_58 14.3
MONOCYTES_59 14.2
MONOCYTES_60 14.2
MONOCYTES_61 14.1
MONOCYTES_62 13.9
MONOCYTES_63 13.6
MONOCYTES_64 13.5
MONOCYTES_65 13.1
MONOCYTES_66 13.0
MONOCYTES_67 13.0
MONOCYTES_68 13.0
MONOCYTES_69 12.9
MONOCYTES_70 12.9
MONOCYTES_71 12.8
MONOCYTES_72 12.7
MONOCYTES_73 12.6
MONOCYTES_74 12.6
MONOCYTES_75 12.6
MONOCYTES_76 12.4
MONOCYTES_77 12.4
MONOCYTES_78 12.4
MONOCYTES_79 12.3
MONOCYTES_80 11.9
MONOCYTES_81 11.8
MONOCYTES_82 11.2
MONOCYTES_83 10.6
MONOCYTES_84 10.6
MONOCYTES_85 10.5
MONOCYTES_86 10.2
MONOCYTES_87 9.7
MONOCYTES_88 9.7
MONOCYTES_89 9.0
MONOCYTES_90 9.0
MONOCYTES_91 8.9
Show allShow less
Non-classical monocyte
TPM: 25.7
Samples: 90

Max TPM: 40.8
Min TPM: 10.9
M2_1 40.8
M2_2 40.5
M2_3 38.9
M2_4 37.3
M2_5 37.2
M2_6 35.9
M2_7 35.8
M2_8 35.7
M2_9 34.3
M2_10 34.2
M2_11 34.0
M2_12 33.8
M2_13 33.7
M2_14 33.6
M2_15 33.4
M2_16 33.3
M2_17 33.1
M2_18 32.9
M2_19 32.8
M2_20 32.4
M2_21 32.0
M2_22 31.5
M2_23 31.4
M2_24 31.3
M2_25 30.4
M2_26 30.0
M2_27 29.8
M2_28 29.8
M2_29 29.8
M2_30 29.6
M2_31 29.3
M2_32 29.2
M2_33 28.8
M2_34 28.6
M2_35 28.5
M2_36 28.3
M2_37 27.7
M2_38 27.6
M2_39 27.5
M2_40 27.4
M2_41 27.2
M2_42 27.0
M2_43 26.9
M2_44 26.5
M2_45 26.0
M2_46 25.5
M2_47 25.3
M2_48 25.0
M2_49 24.9
M2_50 24.6
M2_51 24.3
M2_52 24.3
M2_53 24.1
M2_54 23.9
M2_55 23.6
M2_56 23.4
M2_57 22.9
M2_58 22.7
M2_59 22.6
M2_60 22.5
M2_61 22.4
M2_62 22.1
M2_63 21.6
M2_64 21.0
M2_65 21.0
M2_66 20.8
M2_67 19.9
M2_68 19.8
M2_69 19.3
M2_70 19.0
M2_71 19.0
M2_72 18.2
M2_73 18.2
M2_74 18.1
M2_75 18.0
M2_76 18.0
M2_77 18.0
M2_78 18.0
M2_79 17.9
M2_80 16.9
M2_81 16.7
M2_82 16.3
M2_83 16.3
M2_84 14.7
M2_85 14.6
M2_86 13.8
M2_87 13.5
M2_88 12.6
M2_89 11.8
M2_90 10.9
Show allShow less

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