HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:24.5 nTPM
HPA Brain:52.3 nTPM
GTEx:24.5 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:39.2 nTPM
Mouse:61.0 nTPM
Allen mouse:6.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074550
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.3
Sample id Sample description nTPM
Hippocampus
nTPM: 48.6
1898 Male, age 80, left hemisphere 64.6
2621 Female, age 67, right hemisphere 61.0
2148 Female, age 91, left hemisphere 48.7
1855 Male, age 76, left hemisphere 44.6
1911 Female, age 85, right hemisphere 38.8
2529 Female, age 94, left hemisphere 33.9
Dentate gyrus
nTPM: 49.6
2530 Female, age 94, left hemisphere 70.3
1927 Female, age 91, both hemispheres 62.3
2010 Male, age 76, both hemispheres 46.5
2531 Female, age 67, both hemispheres 45.8
2528 Male, age 74, both hemispheres 43.1
2246 Female, age 85, both hemispheres 29.7
Entorhinal gyrus
nTPM: 50.4
2613 Female, age 94, left hemisphere 84.9
2764 Male, age 80, right hemisphere 53.4
2686 Male, age 75, right hemisphere 53.0
1787 Male, age 76, left hemisphere 43.2
1938 Female, age 85, left hemisphere 42.6
2117 Female, age 91, right hemisphere 25.4
Hippocampus, CA1
nTPM: 51.3
2749 Male, age 80, left hemisphere 87.3
2527 Male, age 74, both hemispheres 58.2
1873 Female, age 85, both hemispheres 55.1
2045 Male, age 76, both hemispheres 29.9
2082 Female, age 91, right hemisphere 25.8
Hippocampus, CA2
nTPM: 47.2
2437 Female, age 94, left hemisphere 64.0
1963 Male, age 80, left hemisphere 58.6
1892 Male, age 76, both hemispheres 57.5
2249 Male, age 74, both hemispheres 48.7
2113 Female, age 91, right hemisphere 28.8
1940 Female, age 85, left hemisphere 25.6
Hippocampus, CA3
nTPM: 52.3
2861 Female, age 67, both hemispheres 69.5
2620 Female, age 94, left hemisphere 65.7
2137 Male, age 80, left hemisphere 62.0
1867 Male, age 76, both hemispheres 44.9
2436 Male, age 74, both hemispheres 37.1
1891 Female, age 85, both hemispheres 34.7
Parahippocampal cortex
nTPM: 44.5
2622 Female, age 67, right hemisphere 64.4
2693 Female, age 94, both hemispheres 52.5
1990 Female, age 91, right hemisphere 48.5
2245 Female, age 91, both hemispheres 44.9
1850 Male, age 80, both hemispheres 43.4
1933 Female, age 85, both hemispheres 40.8
2692 Male, age 74, both hemispheres 40.7
2250 Female, age 67, right hemisphere 39.7
2532 Female, age 72, left hemisphere 36.5
2018 Male, age 76, both hemispheres 33.3
Perirhinal gyrus
nTPM: 45.3
1847 Female, age 91, left hemisphere 54.1
2521 Female, age 94, right hemisphere 48.8
1794 Male, age 80, right hemisphere 44.4
2848 Male, age 76, right hemisphere 39.9
1841 Female, age 85, right hemisphere 39.4
Subiculum
nTPM: 39.5
2438 Female, age 94, left hemisphere 51.3
1901 Male, age 80, both hemispheres 44.2
2619 Male, age 74, both hemispheres 41.1
1977 Female, age 85, both hemispheres 37.3
2729 Female, age 91, right hemisphere 34.1
2042 Male, age 76, both hemispheres 29.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.5
Samples: 255

Max nTPM: 67.5
Min nTPM: 1.1
Std nTPM: 13.5
Median nTPM: 23.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 67.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 63.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 63.3
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 57.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 57.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 54.7
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 53.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 53.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 50.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 49.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 48.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 29.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.2
Pig sample Sample description nTPM
Subiculum
nTPM: 16.8
Samples: 4

Max nTPM: 22.7
Min nTPM: 13.5
Sample A Female 22.7
Sample B Female 14.0
Sample C Male 17.1
Sample D Male 13.5
Dorsal hippocampus
nTPM: 39.3
Samples: 4

Max nTPM: 58.5
Min nTPM: 19.9
Sample A Female 58.5
Sample B Female 50.5
Sample C Male 19.9
Sample D Male 28.1
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.5
Sample A Female 17.4
Sample B Female 14.7
Sample C Male 14.9
Sample D Male 14.5
Ventral hippocampus
nTPM: 34.1
Samples: 4

Max nTPM: 43.8
Min nTPM: 17.8
Sample A Female 43.8
Sample B Female 17.8
Sample C Male 34.8
Sample D Male 39.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 61.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.8
Samples: 4

Max nTPM: 47.3
Min nTPM: 41.9
Sample A Male 41.9
Sample B Male 45.1
Sample C Female 44.7
Sample D Female 47.3
Hippocampal formation
nTPM: 61.0
Samples: 4

Max nTPM: 67.4
Min nTPM: 50.6
Sample A Male 50.6
Sample B Male 67.4
Sample C Female 65.9
Sample D Female 60.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
69837407 Antisense, RP_050217_01_C12, Mouse strain C57BL/6J (56 days, male) 13.4
70795304 Antisense, RP_050712_01_C09, Mouse strain C57BL/6J (56 days, male) 0.0

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