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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Medium
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:93.0 nTPM
HPA:93.0 nTPM
GTEx:67.8 nTPM
FANTOM5:190.4 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA019053Antibody HPA019061
Follicle cells MediumLow
Ovarian stroma cells MediumLow





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.0
overview
Female, age 64
Ovary sample 192
nTPM: 77.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 83.8
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 103.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 105.5
N/A
Female, age 16
Ovary sample 3663
nTPM: 64.6
N/A
Female, age 20
Ovary sample 3664
nTPM: 114.5
N/A
Female, age 32
Ovary sample 3665
nTPM: 101.7

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.8
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 67.8
Samples: 193

Max nTPM: 158.4
Min nTPM: 41.3
Std nTPM: 16.7
Median nTPM: 64.4
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 158.4
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 133.8
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 120.3
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 116.4
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 109.8
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 106.6
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 106.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 105.0
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 104.1
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 103.0
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 101.2
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 99.1
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 93.1
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 90.8
GTEX-R55G-1526-SM-48FER 40-49 years, female 89.9
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 89.7
GTEX-R45C-2526-SM-GRR28 60-69 years, female 89.3
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 88.6
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 88.0
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 87.3
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 86.8
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 85.8
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 85.4
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 85.4
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 84.4
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 81.7
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 81.5
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 81.4
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 81.4
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 81.3
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 81.1
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 81.0
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 80.0
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 80.0
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 79.5
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 78.8
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 78.7
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 78.2
GTEX-Q734-0726-SM-48TZP 40-49 years, female 77.6
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 77.6
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 77.3
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 77.2
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 77.2
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 77.0
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 76.7
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 76.3
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 76.0
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 74.7
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 74.6
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 74.5
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 74.5
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 74.5
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 73.8
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 73.7
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 73.5
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 73.4
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 72.6
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 72.4
GTEX-18D9A-0826-SM-718C1 30-39 years, female 72.1
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 72.1
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 71.8
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 71.7
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 71.5
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 71.5
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 71.3
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 71.3
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 71.2
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 71.2
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 71.2
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 71.1
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 71.0
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 70.9
GTEX-15EOM-1526-SM-68723 20-29 years, female 70.3
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 70.1
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 69.9
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 69.3
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 69.1
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 69.0
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 68.8
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 68.4
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 67.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 67.2
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 66.8
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 66.6
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 66.6
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 66.5
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 66.4
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 66.2
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 66.2
GTEX-14PKV-1226-SM-6871T 20-29 years, female 66.0
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 65.9
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 65.4
GTEX-RU72-2226-SM-46MUE 50-59 years, female 65.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 65.2
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 64.9
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 64.7
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 64.4
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 64.4
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 64.2
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 64.0
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 63.7
GTEX-145ME-1226-SM-5MR87 40-49 years, female 63.5
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 63.5
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 62.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 62.6
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 62.4
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 62.3
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 62.3
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 62.1
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 61.9
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 61.7
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 61.7
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 61.5
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 61.4
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 61.2
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 61.0
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 60.9
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 60.9
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 60.8
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 60.8
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 60.7
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 60.6
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 60.2
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 60.0
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 60.0
GTEX-183WM-1926-SM-72D5F 70-79 years, female 59.6
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 59.3
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 59.3
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 59.1
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 59.0
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 59.0
GTEX-P78B-1926-SM-3P616 40-49 years, female 59.0
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 58.7
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 58.3
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 58.2
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 57.9
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 57.9
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 57.7
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 57.6
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 57.6
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 57.4
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 57.3
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 57.0
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 56.8
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 56.7
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 56.4
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 56.4
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 56.1
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 56.0
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 55.6
GTEX-11I78-1926-SM-59878 50-59 years, female 55.4
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 55.0
GTEX-QCQG-1426-SM-48U22 50-59 years, female 54.8
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 54.7
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 54.6
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 54.6
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 54.4
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 54.3
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 53.9
GTEX-14BIN-1426-SM-664NI 50-59 years, female 53.8
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 53.7
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 53.5
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 53.5
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 53.4
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 53.4
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 52.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 52.5
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 52.1
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 52.1
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 52.1
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 51.8
GTEX-S32W-1226-SM-4AD67 50-59 years, female 51.6
GTEX-S341-0726-SM-4AD5R 40-49 years, female 51.6
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 51.6
GTEX-14JG6-0626-SM-68716 30-39 years, female 50.6
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 50.6
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 49.9
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 49.8
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 49.6
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 49.4
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 49.1
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 49.1
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 48.2
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 48.1
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 46.9
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 46.1
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 46.1
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 45.2
GTEX-QVJO-3126-SM-COH22 60-69 years, female 45.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 44.1
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 43.6
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 41.6
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 41.3
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

190.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 190.4
FF:10020-101D2 47,75,84 years, female 190.4

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