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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • EVOLUTION

  • ENO1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:435.5 nTPM
GTEx:765.2 nTPM
FANTOM5:751.9 Scaled Tags Per Million
Macaque:19.3 nTPM
Pig:406.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

435.5
Sample id Sample description nTPM
Putamen
nTPM: 435.5
2482 Female, age 94, left hemisphere 621.3
1838 Male, age 80, right hemisphere 483.9
2466 Female, age 79, unknown 433.7
1937 Female, age 91, right hemisphere 432.2
1829 Male, age 74, unknown 401.8
2647 Male, age 75, left hemisphere 354.0
2489 Female, age 72, unknown 322.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

765.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 765.2
Samples: 254

Max nTPM: 1558.3
Min nTPM: 324.9
Std nTPM: 208.7
Median nTPM: 734.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1558.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1553.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1526.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1333.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1294.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1288.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1280.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1261.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1254.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1196.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1174.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1156.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1153.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1125.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1117.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1107.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1107.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1100.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1094.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1090.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 1087.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1081.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1074.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1074.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1064.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1046.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1040.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1034.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1033.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1013.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1012.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1007.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 992.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 984.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 973.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 968.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 958.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 956.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 948.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 946.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 938.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 938.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 933.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 932.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 932.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 928.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 923.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 922.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 917.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 905.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 902.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 901.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 895.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 887.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 886.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 884.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 881.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 878.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 878.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 878.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 875.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 872.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 870.8
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 867.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 866.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 863.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 856.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 856.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 853.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 847.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 842.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 841.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 839.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 838.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 835.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 834.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 831.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 831.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 829.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 827.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 825.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 824.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 824.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 818.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 818.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 817.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 817.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 816.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 816.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 814.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 812.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 812.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 808.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 805.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 803.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 802.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 802.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 799.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 799.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 793.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 793.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 783.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 778.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 775.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 774.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 772.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 770.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 768.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 767.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 767.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 765.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 764.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 763.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 763.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 762.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 762.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 760.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 758.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 755.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 751.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 746.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 745.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 744.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 743.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 738.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 736.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 735.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 733.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 733.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 732.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 727.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 724.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 720.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 718.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 718.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 717.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 717.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 717.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 715.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 714.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 712.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 712.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 712.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 711.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 709.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 708.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 708.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 707.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 706.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 705.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 703.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 700.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 700.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 698.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 694.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 689.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 688.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 685.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 684.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 682.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 682.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 680.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 680.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 679.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 675.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 673.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 671.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 670.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 664.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 664.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 662.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 662.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 661.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 660.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 658.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 657.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 656.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 656.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 655.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 654.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 653.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 649.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 648.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 647.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 646.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 645.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 641.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 640.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 638.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 634.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 634.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 630.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 623.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 623.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 620.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 615.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 614.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 611.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 609.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 601.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 600.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 600.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 598.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 594.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 593.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 593.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 593.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 592.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 592.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 590.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 589.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 588.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 588.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 586.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 581.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 575.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 575.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 573.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 573.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 571.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 571.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 562.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 551.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 549.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 548.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 548.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 548.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 542.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 537.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 523.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 517.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 517.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 512.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 511.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 510.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 503.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 491.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 479.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 479.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 476.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 467.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 465.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 454.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 441.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 438.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 435.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 431.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 414.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 391.1
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 390.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 380.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 375.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 371.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 324.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

751.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 751.9
FF:10176-103C5 60 years, female 751.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.3
Macaque sample Sample description nTPM
Putamen
nTPM: 19.3
Samples: 2

Max nTPM: 25.7
Min nTPM: 12.8
Sample A 12.8
Sample B 25.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

406.1
Pig sample Sample description nTPM
Putamen
nTPM: 406.1
Samples: 3

Max nTPM: 513.9
Min nTPM: 295.0
Sample B Female 295.0
Sample C Male 513.9
Sample D Male 409.5

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