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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:152.8 nTPM
HPA Brain:169.9 nTPM
GTEx:152.8 nTPM
Pig:90.4 nTPM
Mouse:46.4 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 140.0
2226 Male, age 75, left hemisphere 148.2
1961 Female, age 42, unknown 131.8
Dorsomedial nucleus
nTPM: 122.2
2041 Female, age 72, unknown 132.0
1989 Male, age 62, unknown 120.3
2017 Female, age 42, unknown 114.4
Lateral hypothalamic area
nTPM: 118.0
1791 Male, age 80, right hemisphere 141.2
2228 Male, age 66, unknown 119.3
2271 Male, age 75, both hemispheres 118.4
2412 Male, age 62, unknown 93.3
Mammillary body
nTPM: 132.6
1923 Female, age 72, unknown 152.9
1945 Male, age 80, right hemisphere 143.5
2413 Male, age 66, unknown 133.6
1834 Female, age 42, unknown 121.7
1948 Female, age 72, unknown 111.4
Paraventricular nucleus
nTPM: 102.1
2700 Male, age 62, unknown 102.1
Preoptic area
nTPM: 120.9
1907 Male, age 80, right hemisphere 132.5
1861 Female, age 42, unknown 127.2
2414 Female, age 72, unknown 103.0
Supraoptic nucleus
nTPM: 169.9
1894 Female, age 72, unknown 216.2
2043 Male, age 62, unknown 183.1
2835 Female, age 72, unknown 110.3
Ventromedial nucleus
nTPM: 139.4
1822 Female, age 42, unknown 140.9
1982 Female, age 72, unknown 137.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 152.8
Samples: 257

Max nTPM: 362.9
Min nTPM: 86.4
Std nTPM: 32.5
Median nTPM: 147.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 362.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 267.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 265.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 262.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 251.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 247.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 243.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 232.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 230.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 228.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 212.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 206.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 205.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 203.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 202.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 201.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 201.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 200.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 196.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 194.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 191.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 191.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 189.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 188.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 186.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 186.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 186.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 185.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 184.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 184.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 183.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 182.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 181.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 181.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 180.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 180.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 180.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 179.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 177.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 177.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 177.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 177.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 176.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 176.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 175.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 174.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 174.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 173.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 173.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 173.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 173.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 173.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 172.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 172.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 172.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 172.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 171.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 170.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 169.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 169.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 169.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 169.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 168.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 168.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 167.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 166.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 166.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 166.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 165.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 165.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 164.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 163.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 163.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 162.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 162.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 162.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 161.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 161.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 161.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 161.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 160.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 160.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 160.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 159.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 159.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 159.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 159.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 159.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 159.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 159.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 159.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 159.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 158.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 158.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 158.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 157.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 157.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 157.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 157.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 157.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 156.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 155.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 155.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 155.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 155.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 154.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 152.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 152.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 152.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 152.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 152.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 151.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 151.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 151.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 151.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 150.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 150.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 150.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 150.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 149.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 149.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 149.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 149.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 149.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 148.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 148.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 148.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 147.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 147.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 147.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 147.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 147.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 146.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 146.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 146.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 145.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 145.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 145.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 145.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 145.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 144.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 144.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 144.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 143.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 143.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 143.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 143.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 143.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 142.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 142.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 142.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 142.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 142.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 142.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 142.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 142.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 141.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 141.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 141.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 140.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 139.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 139.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 139.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 139.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 138.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 138.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 137.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 137.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 137.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 136.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 136.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 136.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 136.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 136.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 136.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 136.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 135.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 135.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 135.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 135.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 135.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 135.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 135.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 134.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 134.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 134.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 134.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 134.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 134.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 134.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 133.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 133.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 133.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 133.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 132.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 132.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 132.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 132.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 132.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 132.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 131.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 131.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 131.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 131.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 131.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 130.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 130.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 129.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 128.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 128.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 126.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 126.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 126.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 126.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 125.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 125.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 125.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 125.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 124.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 123.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 123.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 122.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 122.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 122.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 120.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 120.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 120.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 120.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 119.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 119.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 118.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 118.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 118.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 118.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 117.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 117.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 116.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 115.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 115.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 115.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 114.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 114.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 113.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 112.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 112.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 111.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 111.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 110.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 109.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 107.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 106.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 103.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 101.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 101.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 99.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 92.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 86.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 90.5
Samples: 4

Max nTPM: 112.7
Min nTPM: 74.2
Sample A Female 112.7
Sample B Female 93.4
Sample C Male 81.5
Sample D Male 74.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 46.4
Samples: 4

Max nTPM: 48.7
Min nTPM: 44.6
Sample A Male 47.3
Sample B Male 45.0
Sample C Female 48.7
Sample D Female 44.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.4
71991720 Antisense, RP_051012_03_C12, Mouse strain C57BL/6J (56 days, male) 2.8
70795910 Antisense, RP_050712_02_B12, Mouse strain C57BL/6J (56 days, male) 0.0

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