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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • ACAT1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:20.1 nTPM
GTEx:52.9 nTPM
FANTOM5:74.6 Scaled Tags Per Million
Macaque:29.5 nTPM
Pig:35.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.1
Sample id Sample description nTPM
Putamen
nTPM: 20.1
2482 Female, age 94, left hemisphere 28.3
2466 Female, age 79, unknown 23.3
1829 Male, age 74, unknown 20.8
1838 Male, age 80, right hemisphere 20.3
1937 Female, age 91, right hemisphere 19.9
2647 Male, age 75, left hemisphere 14.4
2489 Female, age 72, unknown 13.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 52.9
Samples: 254

Max nTPM: 110.0
Min nTPM: 27.2
Std nTPM: 13.0
Median nTPM: 49.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 110.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 95.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 94.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 93.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 92.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 91.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 86.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 82.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 80.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 80.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 77.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 76.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 75.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 75.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 75.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 75.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 74.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 73.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 73.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 73.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 72.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 72.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 71.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 71.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 71.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 70.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 70.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 70.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 70.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 69.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 69.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 69.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 67.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 66.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 66.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 66.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 66.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 66.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 66.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 66.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 65.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 65.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 65.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 65.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 65.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 64.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 64.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 64.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 63.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 63.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 62.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 62.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 62.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 62.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 62.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 61.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 61.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 60.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 60.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 60.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 59.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 59.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 59.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 59.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 59.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 59.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 59.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 58.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 58.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 58.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 57.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 57.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 57.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 57.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 57.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 57.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 56.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 56.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 56.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 56.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 56.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 56.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 56.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 56.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 55.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 55.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 55.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 55.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 55.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 54.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 54.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 54.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 54.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 54.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 54.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 54.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 54.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 54.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 54.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 53.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 53.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 53.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 53.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 53.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 53.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 52.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 52.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 52.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 52.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 51.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 51.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 51.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 51.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 51.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 51.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 50.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 50.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 50.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 50.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 50.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 50.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 50.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 49.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 49.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 49.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 49.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 49.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 49.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 48.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 48.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 48.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 48.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 48.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 48.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 48.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 47.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 47.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 47.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 47.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 47.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 47.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 47.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 47.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 46.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 46.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 46.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 46.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 46.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 46.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 46.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 46.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 46.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 46.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 46.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 46.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 46.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 46.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 46.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 46.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 46.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 46.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 45.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 45.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 45.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 45.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 45.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 45.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 45.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 45.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 45.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 45.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 45.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 45.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 45.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 45.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 45.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 44.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 44.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 44.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 44.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 44.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 44.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 44.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 44.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 44.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 44.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 44.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 44.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 43.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 43.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 43.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 43.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 43.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 43.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 43.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 43.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 42.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 42.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 42.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 42.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 42.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 42.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 41.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 41.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 41.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 41.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 41.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 41.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 41.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 41.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 41.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 41.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 40.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 40.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 40.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 40.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 40.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 40.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 40.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 39.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 39.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 39.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 39.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 39.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 39.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 39.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 38.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 38.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 38.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 38.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 38.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 38.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 38.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 37.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 37.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 37.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 37.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 36.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 36.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 36.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 36.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 34.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 34.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 33.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 33.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 32.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 32.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 27.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

74.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 74.6
FF:10176-103C5 60 years, female 74.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.5
Macaque sample Sample description nTPM
Putamen
nTPM: 29.5
Samples: 2

Max nTPM: 29.9
Min nTPM: 29.2
Sample A 29.2
Sample B 29.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.8
Pig sample Sample description nTPM
Putamen
nTPM: 35.8
Samples: 3

Max nTPM: 41.0
Min nTPM: 32.1
Sample B Female 32.1
Sample C Male 41.0
Sample D Male 34.3

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