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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • TIMM21
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:15.7 nTPM
GTEx:22.2 nTPM
FANTOM5:43.8 Scaled Tags Per Million
Macaque:29.1 nTPM
Pig:13.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.7
Sample id Sample description nTPM
Putamen
nTPM: 15.7
2466 Female, age 79, unknown 18.3
1838 Male, age 80, right hemisphere 17.2
1829 Male, age 74, unknown 17.1
2482 Female, age 94, left hemisphere 16.8
1937 Female, age 91, right hemisphere 15.9
2489 Female, age 72, unknown 13.1
2647 Male, age 75, left hemisphere 11.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 22.2
Samples: 254

Max nTPM: 37.6
Min nTPM: 11.4
Std nTPM: 5.1
Median nTPM: 21.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 37.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 37.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 37.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 36.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 36.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 36.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 36.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 36.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 34.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 34.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 33.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 32.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 32.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 31.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 31.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 30.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 30.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 30.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 30.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 29.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 29.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 29.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 29.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 29.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 29.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 29.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 28.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 27.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 27.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 27.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 27.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 27.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 27.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 27.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 27.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 27.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 27.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 27.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 27.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 26.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 26.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 26.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 26.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 26.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 26.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 26.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 26.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 26.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 26.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 26.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 26.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 25.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 25.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 25.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 25.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 25.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 25.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 25.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 25.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 25.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 25.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 24.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 24.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 24.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 24.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 24.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 24.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 24.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 24.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 24.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 24.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 24.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 24.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 24.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 24.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 24.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 24.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 24.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 24.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 24.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 24.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 24.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 24.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 24.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 24.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 24.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 23.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 23.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 23.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 23.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 23.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 23.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 23.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 23.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 23.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 23.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 23.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 23.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 23.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 23.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 23.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 23.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 23.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 23.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 22.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 22.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 22.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 22.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 22.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 22.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 22.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 22.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 22.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 22.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 22.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 22.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 22.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 22.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 22.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 22.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 22.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 21.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 21.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 21.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 21.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 21.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 21.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 21.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 21.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 21.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 21.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 21.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 21.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 21.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 21.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 21.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 21.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 21.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 21.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 21.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 21.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 21.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 21.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 21.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 21.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 21.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 21.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 21.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 21.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 21.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 20.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 20.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 20.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 20.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 20.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 20.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 20.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 20.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 20.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 20.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 20.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 20.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 20.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 20.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 20.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 20.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 20.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 20.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 20.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 20.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 20.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 20.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 20.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 20.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 19.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 19.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 19.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 19.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 19.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 19.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 19.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 19.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 19.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 19.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 19.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 19.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 19.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 19.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 19.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 19.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 19.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 18.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 18.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 18.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 18.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 18.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 18.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 18.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 18.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 18.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 18.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 18.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 17.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 17.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 17.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 17.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 17.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 17.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 17.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 17.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 17.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 17.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 17.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 17.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 17.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 17.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 17.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 16.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 16.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 16.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 16.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 16.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 16.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 16.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 16.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 16.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 16.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 15.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 15.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 15.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 15.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 15.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 15.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 15.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 14.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 14.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 14.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 14.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 14.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 14.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 14.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 14.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 13.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 13.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 12.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 12.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 12.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 12.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 11.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 11.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 11.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

43.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 43.8
FF:10176-103C5 60 years, female 43.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
Macaque sample Sample description nTPM
Putamen
nTPM: 29.1
Samples: 2

Max nTPM: 31.4
Min nTPM: 26.8
Sample A 26.8
Sample B 31.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.2
Pig sample Sample description nTPM
Putamen
nTPM: 13.2
Samples: 3

Max nTPM: 15.9
Min nTPM: 10.1
Sample B Female 10.1
Sample C Male 15.9
Sample D Male 13.6

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