PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:201.8 nTPM
FANTOM5:119.9 Scaled Tags Per Million
Pig:188.2 nTPM
Mouse:92.8 nTPM
Allen mouse:6.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 201.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 135.6
2090 Male, age 80, both hemispheres 163.4
2188 Female, age 91, both hemispheres 142.2
2301 Female, age 85, both hemispheres 138.5
1984 Male, age 76, both hemispheres 98.4
Area postrema
nTPM: 118.8
2306 Male, age 80, both hemispheres 153.5
2799 Male, age 61, both hemispheres 125.5
2054 Male, age 76, both hemispheres 77.4
Dorsal cochlear nucleus
nTPM: 145.3
2802 Male, age 74, right hemisphere 163.7
2370 Male, age 61, both hemispheres 149.5
2378 Male, age 80, both hemispheres 146.5
2187 Female, age 91, both hemispheres 138.9
2058 Male, age 76, both hemispheres 128.2
Dorsal medullary reticular nucleus
nTPM: 145.1
2088 Male, age 76, both hemispheres 148.5
2373 Male, age 61, both hemispheres 143.8
2040 Female, age 85, both hemispheres 143.1
Dorsal motor vagal complex
nTPM: 127.0
2185 Male, age 76, both hemispheres 147.3
2133 Female, age 91, both hemispheres 146.4
2000 Male, age 74, unknown 144.2
2807 Female, age 85, both hemispheres 138.3
2643 Male, age 74, both hemispheres 126.7
2844 Male, age 55, unknown 125.5
2813 Female, age 72, unknown 94.8
2797 Male, age 61, both hemispheres 92.9
Dorsal tegmental nucleus
nTPM: 143.9
2083 Male, age 80, both hemispheres 159.7
2326 Male, age 74, both hemispheres 158.3
2358 Male, age 61, both hemispheres 157.6
1936 Male, age 76, left hemisphere 100.1
Dorsolateral tegmental area
nTPM: 145.4
2337 Male, age 61, both hemispheres 218.7
2654 Male, age 80, both hemispheres 156.3
2751 Female, age 85, both hemispheres 145.6
2360 Male, age 74, both hemispheres 111.3
2141 Male, age 76, both hemispheres 95.0
Gigantocellular reticular nuclei, medullary
nTPM: 139.0
2310 Male, age 80, both hemispheres 159.6
2462 Male, age 74, both hemispheres 150.8
2314 Male, age 61, both hemispheres 143.5
2022 Male, age 76, right hemisphere 132.7
1876 Female, age 85, both hemispheres 127.3
2387 Female, age 91, both hemispheres 119.8
Gigantocellular reticular nuclei, pars
nTPM: 136.9
2330 Male, age 80, both hemispheres 148.1
2336 Male, age 61, both hemispheres 142.3
2084 Female, age 85, both hemispheres 137.8
2706 Male, age 80, both hemispheres 137.5
2168 Male, age 76, both hemispheres 118.5
Inferior olive
nTPM: 140.8
2178 Male, age 61, both hemispheres 168.1
2563 Male, age 74, both hemispheres 152.7
2628 Female, age 91, both hemispheres 134.8
2379 Male, age 80, both hemispheres 124.5
2085 Female, age 85, both hemispheres 123.9
Kolliker-Fuse nucleus
nTPM: 125.7
2793 Female, age 91, left hemisphere 173.6
2163 Male, age 80, both hemispheres 132.2
2315 Male, age 76, right hemisphere 71.2
Lateral lemniscal nuclei
nTPM: 137.9
2453 Male, age 74, right hemisphere 161.6
2320 Female, age 91, left hemisphere 155.8
2746 Female, age 85, left hemisphere 138.7
2036 Male, age 80, both hemispheres 122.1
2169 Male, age 76, both hemispheres 111.4
Lateral medullary reticular nucleus
nTPM: 152.1
2852 Male, age 80, both hemispheres 189.2
2305 Male, age 74, both hemispheres 177.7
2190 Female, age 85, both hemispheres 153.0
2044 Male, age 76, both hemispheres 136.1
2374 Male, age 61, both hemispheres 134.7
2804 Female, age 91, both hemispheres 122.0
Lateral parabrachial nucleus
nTPM: 142.7
2790 Male, age 61, both hemispheres 187.1
2013 Male, age 80, both hemispheres 148.3
2139 Female, age 85, right hemisphere 122.3
2792 Male, age 76, both hemispheres 113.1
Lateral vestibular nucleus
nTPM: 141.7
2311 Male, age 80, both hemispheres 158.2
2184 Male, age 76, both hemispheres 125.3
Locus coeruleus
nTPM: 107.5
2162 Male, age 80, both hemispheres 132.5
2317 Female, age 72, unknown 129.5
2720 Male, age 74, both hemispheres 113.2
2123 Female, age 91, both hemispheres 111.3
2014 Male, age 55, unknown 108.5
1980 Male, age 76, both hemispheres 87.2
2788 Male, age 74, unknown 70.2
Medial olivary nucleus
nTPM: 137.6
1943 Male, age 61, both hemispheres 187.0
2851 Male, age 80, both hemispheres 143.1
2138 Female, age 91, both hemispheres 120.4
1962 Male, age 76, both hemispheres 99.8
Medial parabrachial nucleus
nTPM: 136.6
2156 Male, age 61, both hemispheres 154.8
2463 Female, age 85, right hemisphere 144.4
2170 Female, age 91, both hemispheres 136.3
2786 Male, age 76, both hemispheres 124.4
2854 Male, age 80, both hemispheres 123.0
Medial periolivary nuclei
nTPM: 129.3
2081 Male, age 80, both hemispheres 156.3
2791 Male, age 74, right hemisphere 135.4
2458 Female, age 91, both hemispheres 134.9
2063 Male, age 76, both hemispheres 117.0
2171 Female, age 85, both hemispheres 103.0
Medial vestibular nucleus
nTPM: 129.6
2093 Male, age 80, both hemispheres 151.8
2801 Male, age 74, both hemispheres 145.6
2624 Male, age 61, both hemispheres 142.0
2803 Female, age 91, both hemispheres 140.0
2743 Female, age 85, both hemispheres 112.0
2134 Male, age 76, both hemispheres 86.0
Motor facial nucleus
nTPM: 133.8
2365 Male, age 74, right hemisphere 160.3
2126 Male, age 61, both hemispheres 149.9
2697 Female, age 85, both hemispheres 133.6
2327 Male, age 80, both hemispheres 129.2
2795 Female, age 91, both hemispheres 116.3
2062 Male, age 76, both hemispheres 113.2
Motor hypoglossal nucleus
nTPM: 144.3
2182 Male, age 80, both hemispheres 189.3
2132 Female, age 85, both hemispheres 181.9
2125 Female, age 91, both hemispheres 168.9
2277 Male, age 76, both hemispheres 91.7
2461 Male, age 61, both hemispheres 90.0
Motor trigeminal nucleus
nTPM: 144.0
2560 Male, age 74, both hemispheres 176.8
2321 Female, age 91, both hemispheres 147.0
2335 Male, age 61, both hemispheres 144.8
2309 Male, age 76, both hemispheres 127.9
2079 Male, age 80, both hemispheres 123.6
Nuclei of the trapezoid body
nTPM: 118.4
2166 Male, age 80, both hemispheres 139.4
2368 Female, age 91, both hemispheres 129.8
1983 Male, age 76, both hemispheres 109.8
2159 Male, age 61, both hemispheres 108.9
2735 Female, age 85, both hemispheres 103.9
Nucleus ambiguus
nTPM: 201.8
2096 Female, age 85, both hemispheres 268.7
2071 Male, age 76, both hemispheres 134.9
Nucleus cuneatus
nTPM: 145.6
2564 Male, age 74, both hemispheres 171.8
2100 Male, age 76, both hemispheres 154.2
2381 Male, age 80, both hemispheres 153.5
2380 Male, age 80, both hemispheres 150.7
2808 Female, age 85, both hemispheres 149.0
2562 Male, age 61, both hemispheres 140.6
2805 Female, age 91, both hemispheres 133.7
2376 Male, age 61, both hemispheres 132.1
2131 Male, age 76, both hemispheres 125.3
Nucleus gracilis
nTPM: 159.3
2382 Male, age 80, both hemispheres 167.4
2299 Female, age 85, both hemispheres 166.8
2627 Male, age 74, both hemispheres 143.7
Nucleus raphe magnus
nTPM: 121.4
2455 Male, age 74, both hemispheres 147.2
2328 Male, age 80, both hemispheres 146.3
2459 Female, age 91, both hemispheres 132.1
2051 Male, age 76, both hemispheres 120.8
2172 Female, age 85, both hemispheres 103.8
2160 Male, age 61, both hemispheres 78.2
Nucleus raphe obscurus
nTPM: 129.3
2845 Female, age 85, midline 139.2
2800 Male, age 61, midline 128.2
2142 Male, age 76, midline 120.5
Nucleus raphe pallidus
nTPM: 173.5
1924 Male, age 61, midline 233.6
2183 Male, age 80, midline 159.7
2145 Male, age 76, midline 127.3
Nucleus tractus solitarii
nTPM: 98.3
2307 Male, age 80, both hemispheres 121.1
2191 Female, age 85, both hemispheres 110.7
2656 Male, age 76, both hemispheres 98.8
2144 Female, age 91, right hemisphere 62.5
Paramedian reticular nucleus
nTPM: 117.6
2057 Male, age 80, both hemispheres 149.0
2313 Male, age 61, both hemispheres 123.4
2050 Female, age 85, both hemispheres 113.1
2052 Male, age 76, both hemispheres 84.8
Parvicellular reticular nuclei
nTPM: 135.5
2558 Male, age 74, both hemispheres 161.1
2119 Male, age 80, both hemispheres 132.3
2095 Male, age 76, both hemispheres 113.0
Parvicellular reticular nuclei, medullary
nTPM: 142.4
2189 Female, age 91, both hemispheres 150.2
2181 Male, age 80, left hemisphere 138.8
2091 Female, age 85, both hemispheres 138.2
Pedunculopontine tegmental nucleus
nTPM: 133.5
2338 Male, age 61, both hemispheres 148.0
2334 Male, age 80, both hemispheres 138.2
1921 Female, age 85, both hemispheres 114.2
Peritrigeminal nucleus
nTPM: 135.9
2067 Female, age 85, both hemispheres 149.3
2179 Male, age 61, both hemispheres 146.6
2136 Male, age 76, both hemispheres 111.7
Pontine nuclei
nTPM: 141.2
2115 Male, age 80, left hemisphere 175.0
2454 Male, age 74, left hemisphere 164.9
2319 Female, age 91, both hemispheres 155.3
2109 Female, age 72, unknown 145.5
1863 Male, age 55, unknown 137.1
1968 Male, age 76, left hemisphere 131.0
2787 Female, age 85, both hemispheres 125.1
2727 Male, age 61, right hemisphere 95.5
Pontine raphe nucleus
nTPM: 113.6
2122 Female, age 85, midline 115.6
2853 Male, age 76, midline 111.7
Posteroventral cochlear nucleus
nTPM: 142.1
2135 Female, age 91, both hemispheres 153.9
2070 Male, age 76, both hemispheres 147.5
2341 Male, age 80, both hemispheres 144.5
2371 Male, age 61, both hemispheres 137.1
2752 Female, age 85, both hemispheres 127.4
Prepositus hypoglossal nucleus
nTPM: 135.0
2086 Male, age 80, both hemispheres 141.2
2855 Female, age 85, right hemisphere 128.8
Principal sensory trigeminal nucleus
nTPM: 115.8
2367 Female, age 91, left hemisphere 144.2
2324 Male, age 76, both hemispheres 114.8
2008 Male, age 80, left hemisphere 111.6
2158 Male, age 61, both hemispheres 92.7
Reticular pontine nucleus, caudal
nTPM: 144.1
2559 Male, age 74, both hemispheres 175.9
2457 Female, age 91, both hemispheres 148.9
2092 Male, age 76, both hemispheres 126.1
2332 Male, age 80, right hemisphere 125.5
Reticular pontine nucleus, oral
nTPM: 142.8
2361 Male, age 74, both hemispheres 156.0
2167 Male, age 76, both hemispheres 145.7
1939 Male, age 80, both hemispheres 145.5
2366 Female, age 91, both hemispheres 143.3
2012 Female, age 85, both hemispheres 123.6
Reticulotegmental nucleus
nTPM: 143.6
2452 Male, age 74, both hemispheres 185.8
2333 Male, age 80, both hemispheres 150.2
2322 Female, age 91, both hemispheres 136.5
2325 Male, age 76, both hemispheres 101.7
Spinal trigeminal nucleus, caudal
nTPM: 154.7
2308 Male, age 80, both hemispheres 172.6
2312 Male, age 61, both hemispheres 170.4
2642 Male, age 74, both hemispheres 147.5
2447 Male, age 76, both hemispheres 145.9
2390 Female, age 91, both hemispheres 137.1
Spinal trigeminal nucleus, interpolar
nTPM: 127.8
2386 Female, age 85, both hemispheres 148.8
2033 Male, age 80, both hemispheres 143.1
2389 Female, age 91, both hemispheres 129.2
2066 Male, age 76, right hemisphere 117.4
2625 Male, age 61, both hemispheres 100.7
Spinal trigeminal nucleus, oral
nTPM: 131.1
1978 Male, age 76, both hemispheres 146.2
2164 Male, age 80, both hemispheres 142.8
2737 Female, age 85, both hemispheres 104.3
Spinal vestibular nucleus
nTPM: 156.2
2748 Male, age 76, both hemispheres 182.0
2384 Male, age 74, both hemispheres 172.2
2186 Female, age 91, both hemispheres 166.6
2780 Male, age 80, both hemispheres 153.5
2806 Female, age 85, both hemispheres 142.0
2796 Male, age 61, both hemispheres 120.9
Subcoeruleus area
nTPM: 137.6
2369 Female, age 85, left hemisphere 159.5
2451 Male, age 74, both hemispheres 154.8
2323 Female, age 91, left hemisphere 144.0
2089 Male, age 76, left hemisphere 119.0
1958 Male, age 80, both hemispheres 110.7
Superior olive
nTPM: 136.5
2561 Female, age 91, both hemispheres 154.7
2364 Male, age 74, right hemisphere 148.8
2329 Male, age 80, right hemisphere 144.9
2020 Male, age 76, both hemispheres 131.7
1875 Female, age 85, both hemispheres 102.4
Superior vestibular nucleus
nTPM: 107.0
2015 Male, age 80, both hemispheres 137.7
2061 Male, age 76, both hemispheres 97.7
2383 Male, age 74, both hemispheres 85.6
Ventral medullary reticular nucleus
nTPM: 163.5
2060 Male, age 76, both hemispheres 183.5
2372 Male, age 61, both hemispheres 143.5
Ventral periolivary nuclei
nTPM: 119.5
2165 Male, age 80, both hemispheres 130.6
2023 Male, age 76, both hemispheres 126.6
2794 Female, age 91, left hemisphere 117.8
2130 Female, age 85, both hemispheres 103.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 150.0
2118 Male, age 80, both hemispheres 177.3
2741 Female, age 85, both hemispheres 152.5
2180 Male, age 61, both hemispheres 149.0
2302 Female, age 91, both hemispheres 145.0
1986 Male, age 76, both hemispheres 126.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 141.9
2449 Male, age 74, both hemispheres 163.5
2359 Male, age 61, both hemispheres 152.8
2456 Female, age 91, both hemispheres 152.0
2161 Male, age 80, both hemispheres 146.0
2840 Female, age 85, both hemispheres 121.1
1959 Male, age 76, both hemispheres 116.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 119.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 115.6
FF:10165-103B3 76 years, female 133.6
FF:10182-103D2 60 years, female 97.6
Medulla oblongata
Scaled Tags Per Million: 91.2
FF:10038-101F2 18-64 years, mixed 114.3
FF:10155-103A2 76 years, female 94.0
FF:10174-103C3 60 years, female 65.3
Pons
Scaled Tags Per Million: 119.9
FF:10033-101E6 18-54 years, mixed 119.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 188.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 188.2
Samples: 4

Max nTPM: 205.8
Min nTPM: 154.7
Sample A Female 205.8
Sample B Female 154.7
Sample C Male 194.9
Sample D Male 197.5
Pons
nTPM: 174.7
Samples: 4

Max nTPM: 263.9
Min nTPM: 123.7
Sample A Female 263.9
Sample B Female 123.7
Sample C Male 143.9
Sample D Male 167.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 92.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 92.8
Samples: 4

Max nTPM: 98.3
Min nTPM: 88.7
Sample A Male 98.3
Sample B Male 91.4
Sample C Female 88.7
Sample D Female 92.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.1
74658080 Antisense, RP_060220_04_D05, Mouse strain C57BL/6J (56 days, male) 6.4
69672593 Antisense, RP_050428_04_B04, Mouse strain C57BL/6J (56 days, male) 5.7
Pons
Expression energy: 6.2
74658080 Antisense, RP_060220_04_D05, Mouse strain C57BL/6J (56 days, male) 6.7
69672593 Antisense, RP_050428_04_B04, Mouse strain C57BL/6J (56 days, male) 5.6

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