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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • ACTB
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:1734.2 nTPM
GTEx:1954.1 nTPM
FANTOM5:2494.9 Scaled Tags Per Million
Macaque:1347.0 nTPM
Pig:2041.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1734.2
Sample id Sample description nTPM
Putamen
nTPM: 1734.2
1838 Male, age 80, right hemisphere 1921.4
1829 Male, age 74, unknown 1888.9
2466 Female, age 79, unknown 1877.8
1937 Female, age 91, right hemisphere 1862.7
2482 Female, age 94, left hemisphere 1743.0
2489 Female, age 72, unknown 1496.9
2647 Male, age 75, left hemisphere 1348.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1954.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1954.1
Samples: 254

Max nTPM: 4012.9
Min nTPM: 1013.4
Std nTPM: 462.3
Median nTPM: 1880.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 4012.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 3896.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 3626.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 3615.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3414.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 3348.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 3103.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 3070.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 3031.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2968.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2812.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 2772.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 2755.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 2729.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 2708.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 2649.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 2648.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 2622.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2615.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 2590.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 2573.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 2561.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 2539.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 2528.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 2516.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 2511.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 2504.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2498.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2498.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 2451.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 2449.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 2444.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2427.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 2422.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 2392.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 2387.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 2385.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 2385.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2364.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 2363.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 2354.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2348.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 2337.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 2333.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 2316.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 2313.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 2312.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 2304.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 2292.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 2277.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 2263.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 2260.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 2248.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2241.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2236.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 2228.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 2205.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 2186.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 2183.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 2180.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 2169.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 2160.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 2151.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2148.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 2145.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 2142.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 2131.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 2123.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 2118.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 2114.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 2111.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 2110.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2106.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 2105.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 2101.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 2099.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 2093.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 2085.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 2070.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 2057.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 2056.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 2055.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 2049.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 2048.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 2046.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 2044.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 2041.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 2038.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2030.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 2029.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2022.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 2019.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 2016.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 2007.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 2005.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 2003.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 2002.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1993.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1989.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1976.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1968.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1967.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 1965.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1960.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1959.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1956.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1947.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1946.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1943.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1941.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1936.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1933.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1932.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1918.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1915.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1912.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1899.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1897.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1897.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1895.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1894.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1894.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1892.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1883.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1883.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1881.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1881.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1879.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1872.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1870.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1867.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1865.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1861.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1860.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1858.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1857.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1850.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 1846.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1840.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1830.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1830.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1828.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1824.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1822.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1821.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1820.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1819.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1819.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1818.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1816.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1811.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1807.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1805.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1798.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1788.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1788.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1788.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1787.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1785.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1783.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1782.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1771.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1770.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1768.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1764.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1757.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 1753.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1732.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1728.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1727.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1725.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1720.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1718.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1718.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1714.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1709.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 1708.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1702.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1700.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1695.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1694.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1692.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1690.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1680.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1677.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1674.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1674.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1671.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1661.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1659.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1656.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1651.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1646.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1646.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1639.9
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1636.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 1631.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1627.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 1627.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1627.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1625.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1625.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1619.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1615.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1606.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1599.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1595.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1584.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1584.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1582.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1577.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1569.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1553.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 1552.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1551.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1549.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1530.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 1518.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1513.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1508.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1501.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1491.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1479.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 1458.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1454.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1453.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1451.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1449.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1430.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1422.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1417.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1404.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1400.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 1395.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1390.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1390.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1389.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1383.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1382.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1379.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1376.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1376.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1357.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 1354.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1343.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 1332.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1327.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1327.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1315.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1260.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1216.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1139.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1114.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 1013.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2494.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 2494.9
FF:10176-103C5 60 years, female 2494.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1347.0
Macaque sample Sample description nTPM
Putamen
nTPM: 1347.0
Samples: 2

Max nTPM: 1423.5
Min nTPM: 1270.4
Sample A 1270.4
Sample B 1423.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2041.6
Pig sample Sample description nTPM
Putamen
nTPM: 2041.6
Samples: 3

Max nTPM: 2332.7
Min nTPM: 1527.4
Sample B Female 1527.4
Sample C Male 2332.7
Sample D Male 2264.6

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