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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

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  • BLOOD

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  • STRUCTURE

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  • RAP1GAP
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

83.992
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:50.5 nTPM
HPA Brain:87.3 nTPM
GTEx:50.5 nTPM
Pig:39.3 nTPM
Mouse:79.6 nTPM
Allen mouse:12.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA001922
Hypothalamus mean intensity 83.992
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus -
Periventricular hypothalamic nucleus 83.992
Supraoptic nucleus 51.308
Tuberal nucleus -
Ventral tuberomammillary nucleus -
Lateral preoptic area 26.748
Medial preoptic area 23.059
Suprachiasmatic nucleus 78.741
Paraventricular hypothalamic nucleus 48.929
Anterior hypothalamic area, central 17.354
Ventral medial hypothalamic nucleus 20.523
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 79.050
Arcuate nucleus* -
Peduncular part of lateral hypothalmus -
Dorsal medial hypothalamic nucleus 14.364
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 68.3
2226 Male, age 75, left hemisphere 73.2
1961 Female, age 42, unknown 63.3
Dorsomedial nucleus
nTPM: 62.4
1989 Male, age 62, unknown 70.6
2041 Female, age 72, unknown 64.0
2017 Female, age 42, unknown 52.7
Lateral hypothalamic area
nTPM: 87.3
2228 Male, age 66, unknown 101.2
2271 Male, age 75, both hemispheres 93.9
1791 Male, age 80, right hemisphere 87.4
2412 Male, age 62, unknown 66.7
Mammillary body
nTPM: 81.5
1923 Female, age 72, unknown 120.4
2413 Male, age 66, unknown 90.6
1948 Female, age 72, unknown 74.5
1834 Female, age 42, unknown 70.1
1945 Male, age 80, right hemisphere 52.1
Paraventricular nucleus
nTPM: 60.0
2700 Male, age 62, unknown 60.0
Preoptic area
nTPM: 63.0
1907 Male, age 80, right hemisphere 81.6
1861 Female, age 42, unknown 53.9
2414 Female, age 72, unknown 53.6
Supraoptic nucleus
nTPM: 45.0
2835 Female, age 72, unknown 54.3
1894 Female, age 72, unknown 45.2
2043 Male, age 62, unknown 35.6
Ventromedial nucleus
nTPM: 83.3
1982 Female, age 72, unknown 99.5
1822 Female, age 42, unknown 67.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 50.5
Samples: 257

Max nTPM: 277.9
Min nTPM: 14.3
Std nTPM: 27.0
Median nTPM: 46.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 277.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 237.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 176.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 134.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 130.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 120.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 114.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 91.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 89.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 88.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 87.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 86.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 85.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 82.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 81.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 78.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 77.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 77.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 77.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 77.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 76.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 71.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 71.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 71.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 70.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 70.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 70.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 69.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 69.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 69.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 69.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 68.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 68.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 67.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 67.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 66.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 66.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 66.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 65.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 65.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 65.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 64.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 64.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 64.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 64.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 64.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 63.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 63.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 61.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 61.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 61.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 60.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 60.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 59.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 59.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 59.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 58.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 57.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 57.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 57.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 57.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 56.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 56.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 56.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 56.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 55.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 55.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 55.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 55.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 55.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 55.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 55.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 55.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 54.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 54.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 54.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 54.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 53.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 53.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 53.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 53.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 53.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 53.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 53.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 53.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 53.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 53.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 52.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 52.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 52.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 52.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 51.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 51.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 51.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 51.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 51.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 51.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 51.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 51.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 51.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 50.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 50.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 50.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 50.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 50.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 50.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 50.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 49.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 49.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 49.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 49.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 49.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 48.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 48.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 48.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 48.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 48.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 48.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 48.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 47.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 47.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 47.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 47.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 47.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 47.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 47.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 46.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 46.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 46.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 46.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 46.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 46.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 46.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 46.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 46.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 45.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 45.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 45.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 44.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 44.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 44.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 44.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 44.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 44.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 43.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 43.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 43.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 43.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 42.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 42.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 42.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 42.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 42.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 42.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 42.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 42.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 42.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 42.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 42.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 41.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 41.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 41.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 41.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 41.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 41.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 41.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 41.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 41.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 41.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 41.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 41.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 41.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 41.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 40.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 40.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 40.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 40.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 39.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 39.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 39.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 39.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 38.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 38.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 38.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 38.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 37.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 37.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 37.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 37.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 37.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 37.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 37.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 37.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 36.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 36.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 36.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 35.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 35.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 35.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 35.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 35.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 35.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 34.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 34.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 34.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 34.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 34.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 33.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 33.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 33.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 33.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 33.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 32.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 32.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 31.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 31.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 31.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 30.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 30.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 30.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 30.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 29.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 29.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 29.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 29.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 28.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 28.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 28.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 28.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 27.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 27.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 26.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 24.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 24.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 24.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 23.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 23.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 23.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 23.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 23.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 23.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 22.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 22.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 22.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 21.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 20.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 20.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 19.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 18.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 18.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 16.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 14.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 14.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 14.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 39.3
Samples: 4

Max nTPM: 49.5
Min nTPM: 33.7
Sample A Female 49.5
Sample B Female 36.8
Sample C Male 37.3
Sample D Male 33.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 79.6
Samples: 4

Max nTPM: 83.8
Min nTPM: 73.2
Sample A Male 79.4
Sample B Male 82.1
Sample C Female 73.2
Sample D Female 83.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 12.0
68798974 Antisense, RP_050217_01_G02, Mouse strain C57BL/6J (56 days, male) 12.0

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