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  • TISSUE

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  • ITM2A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:56.4 nTPM
HPA Brain:86.4 nTPM
GTEx:56.4 nTPM
Pig:31.3 nTPM
Mouse:111.8 nTPM
Allen mouse:1.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 20.0
2226 Male, age 75, left hemisphere 29.1
1961 Female, age 42, unknown 10.8
Dorsomedial nucleus
nTPM: 22.8
1989 Male, age 62, unknown 40.5
2017 Female, age 42, unknown 14.8
2041 Female, age 72, unknown 13.0
Lateral hypothalamic area
nTPM: 38.1
2271 Male, age 75, both hemispheres 46.6
2228 Male, age 66, unknown 41.2
1791 Male, age 80, right hemisphere 33.3
2412 Male, age 62, unknown 31.3
Mammillary body
nTPM: 86.4
2413 Male, age 66, unknown 147.5
1923 Female, age 72, unknown 103.6
1948 Female, age 72, unknown 66.3
1945 Male, age 80, right hemisphere 63.0
1834 Female, age 42, unknown 51.6
Paraventricular nucleus
nTPM: 25.9
2700 Male, age 62, unknown 25.9
Preoptic area
nTPM: 23.2
2414 Female, age 72, unknown 29.9
1907 Male, age 80, right hemisphere 21.5
1861 Female, age 42, unknown 18.4
Supraoptic nucleus
nTPM: 33.5
2835 Female, age 72, unknown 46.7
1894 Female, age 72, unknown 34.8
2043 Male, age 62, unknown 18.9
Ventromedial nucleus
nTPM: 12.4
1822 Female, age 42, unknown 13.2
1982 Female, age 72, unknown 11.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 56.4
Samples: 257

Max nTPM: 357.9
Min nTPM: 8.1
Std nTPM: 43.8
Median nTPM: 45.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 357.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 252.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 232.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 202.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 200.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 181.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 168.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 164.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 158.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 151.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 147.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 137.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 136.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 134.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 134.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 131.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 129.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 126.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 120.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 119.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 118.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 117.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 115.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 115.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 111.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 107.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 103.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 102.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 102.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 101.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 99.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 98.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 98.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 98.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 93.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 93.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 90.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 90.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 89.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 89.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 89.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 87.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 86.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 86.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 85.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 84.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 82.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 79.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 77.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 76.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 75.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 74.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 74.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 74.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 73.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 73.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 73.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 73.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 73.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 73.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 72.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 72.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 72.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 71.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 71.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 70.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 70.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 69.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 69.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 68.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 67.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 65.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 65.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 65.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 64.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 64.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 61.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 61.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 61.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 61.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 61.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 60.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 60.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 60.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 59.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 59.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 59.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 59.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 58.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 58.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 58.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 57.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 57.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 56.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 56.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 56.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 56.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 55.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 55.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 55.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 54.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 54.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 53.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 53.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 53.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 52.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 52.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 52.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 51.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 51.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 50.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 50.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 50.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 49.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 49.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 49.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 49.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 49.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 48.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 47.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 47.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 46.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 46.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 46.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 46.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 46.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 45.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 45.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 45.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 44.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 43.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 43.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 43.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 43.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 42.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 41.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 41.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 41.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 41.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 41.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 41.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 41.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 40.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 40.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 40.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 40.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 39.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 38.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 38.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 38.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 37.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 37.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 37.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 37.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 36.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 36.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 35.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 35.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 35.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 35.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 34.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 34.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 34.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 34.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 33.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 33.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 33.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 33.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 33.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 32.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 32.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 32.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 32.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 31.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 30.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 30.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 30.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 30.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 30.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 29.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 29.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 29.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 29.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 28.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 28.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 28.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 28.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 28.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 28.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 27.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 27.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 27.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 27.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 27.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 27.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 27.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 27.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 26.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 26.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 26.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 25.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 25.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 25.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 25.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 25.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 25.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 25.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 24.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 24.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 24.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 24.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 24.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 24.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 23.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 23.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 23.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 23.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 23.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 22.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 22.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 21.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 21.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 21.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 20.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 20.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 20.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 20.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 20.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 19.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 19.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 19.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 19.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 18.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 18.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 18.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 18.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 17.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 17.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 17.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 16.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 16.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 15.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 15.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 14.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 14.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 14.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 13.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 13.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 13.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 13.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 12.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 11.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 10.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 10.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 8.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 8.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 31.3
Samples: 4

Max nTPM: 32.8
Min nTPM: 29.5
Sample A Female 32.8
Sample B Female 32.1
Sample C Male 30.8
Sample D Male 29.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 111.8
Samples: 4

Max nTPM: 118.6
Min nTPM: 106.8
Sample A Male 111.0
Sample B Male 110.6
Sample C Female 106.8
Sample D Female 118.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.5
74881146 Antisense, RP_060220_01_A04, Mouse strain C57BL/6J (56 days, male) 2.2
69549248 Antisense, RP_050125_01_C03, Mouse strain C57BL/6J (56 days, male) 0.8

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