ITM2A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • ITM2A
IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:130.9 nTPM
Monaco:117.8 nTPM
Schmiedel:102.9 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

130.9
HPA sample nTPM
NK-cell
nTPM: 130.9
Samples: 6

Max nTPM: 212.3
Min nTPM: 62.9
P10809_1013 84.7
P10809_1033 62.9
P10809_1052 98.3
P10809_1071 148.5
P10809_1093 212.3
P10809_1103 178.4

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

117.8
Monaco sample nTPM
NK-cell
nTPM: 117.8
Samples: 4

Max nTPM: 191.4
Min nTPM: 54.3
RHH5316_R3683 125.6
RHH5224_R3596 54.3
RHH5253_R3625 99.7
RHH5282_R3654 191.4

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

102.9
Schmiedel sample id TPM
NK-cell
TPM: 102.9
Samples: 90

Max TPM: 235.3
Min TPM: 34.1
NK_1 235.3
NK_2 200.2
NK_3 193.6
NK_4 185.2
NK_5 175.4
NK_6 172.3
NK_7 165.1
NK_8 164.3
NK_9 154.2
NK_10 151.1
NK_11 150.1
NK_12 147.5
NK_13 146.7
NK_14 142.2
NK_15 141.7
NK_16 141.4
NK_17 139.0
NK_18 132.2
NK_19 130.5
NK_20 124.3
NK_21 123.8
NK_22 123.2
NK_23 122.8
NK_24 122.6
NK_25 122.5
NK_26 121.4
NK_27 120.1
NK_28 119.0
NK_29 116.8
NK_30 116.3
NK_31 115.8
NK_32 115.8
NK_33 114.4
NK_34 114.3
NK_35 113.1
NK_36 111.6
NK_37 110.8
NK_38 110.4
NK_39 109.4
NK_40 109.3
NK_41 107.8
NK_42 107.3
NK_43 107.0
NK_44 107.0
NK_45 106.2
NK_46 105.8
NK_47 105.5
NK_48 103.5
NK_49 102.7
NK_50 100.5
NK_51 98.5
NK_52 98.3
NK_53 97.4
NK_54 96.3
NK_55 95.9
NK_56 92.7
NK_57 91.5
NK_58 89.7
NK_59 85.3
NK_60 84.0
NK_61 83.2
NK_62 82.9
NK_63 79.4
NK_64 78.0
NK_65 77.8
NK_66 73.8
NK_67 69.4
NK_68 68.1
NK_69 68.0
NK_70 65.4
NK_71 63.8
NK_72 63.2
NK_73 61.9
NK_74 61.5
NK_75 59.5
NK_76 56.6
NK_77 56.3
NK_78 52.3
NK_79 52.2
NK_80 52.1
NK_81 50.6
NK_82 49.4
NK_83 47.4
NK_84 47.2
NK_85 45.7
NK_86 41.5
NK_87 39.0
NK_88 38.7
NK_89 36.1
NK_90 34.1
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.