HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:373.4 nTPM
HPA Brain:230.9 nTPM
GTEx:373.4 nTPM
FANTOM5:274.1 Scaled Tags Per Million
Pig:134.6 nTPM
Mouse:119.4 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 230.9
Sample id Sample description nTPM
Hippocampus
nTPM: 200.9
2529 Female, age 94, left hemisphere 233.9
1911 Female, age 85, right hemisphere 216.3
2621 Female, age 67, right hemisphere 213.8
1855 Male, age 76, left hemisphere 193.4
1898 Male, age 80, left hemisphere 176.6
2148 Female, age 91, left hemisphere 171.8
Dentate gyrus
nTPM: 217.7
2530 Female, age 94, left hemisphere 494.4
2531 Female, age 67, both hemispheres 224.3
2010 Male, age 76, both hemispheres 195.0
2246 Female, age 85, both hemispheres 160.1
2528 Male, age 74, both hemispheres 132.5
1927 Female, age 91, both hemispheres 99.7
Entorhinal gyrus
nTPM: 203.2
2686 Male, age 75, right hemisphere 348.9
2117 Female, age 91, right hemisphere 236.0
2764 Male, age 80, right hemisphere 186.9
2613 Female, age 94, left hemisphere 166.3
1787 Male, age 76, left hemisphere 141.4
1938 Female, age 85, left hemisphere 139.6
Hippocampus, CA1
nTPM: 142.3
1873 Female, age 85, both hemispheres 170.2
2749 Male, age 80, left hemisphere 141.5
2082 Female, age 91, right hemisphere 140.9
2527 Male, age 74, both hemispheres 130.7
2045 Male, age 76, both hemispheres 128.0
Hippocampus, CA2
nTPM: 178.7
1963 Male, age 80, left hemisphere 252.5
2437 Female, age 94, left hemisphere 244.0
1940 Female, age 85, left hemisphere 154.5
2249 Male, age 74, both hemispheres 148.8
1892 Male, age 76, both hemispheres 137.6
2113 Female, age 91, right hemisphere 134.6
Hippocampus, CA3
nTPM: 144.1
1891 Female, age 85, both hemispheres 206.4
2861 Female, age 67, both hemispheres 181.4
1867 Male, age 76, both hemispheres 173.3
2137 Male, age 80, left hemisphere 109.6
2620 Female, age 94, left hemisphere 107.6
2436 Male, age 74, both hemispheres 86.5
Parahippocampal cortex
nTPM: 153.6
2532 Female, age 72, left hemisphere 248.2
2692 Male, age 74, both hemispheres 225.8
2622 Female, age 67, right hemisphere 204.8
2245 Female, age 91, both hemispheres 164.7
2018 Male, age 76, both hemispheres 149.9
1990 Female, age 91, right hemisphere 145.4
1933 Female, age 85, both hemispheres 117.2
1850 Male, age 80, both hemispheres 116.7
2693 Female, age 94, both hemispheres 86.5
2250 Female, age 67, right hemisphere 76.4
Perirhinal gyrus
nTPM: 79.6
2848 Male, age 76, right hemisphere 105.4
1847 Female, age 91, left hemisphere 80.7
1794 Male, age 80, right hemisphere 78.5
1841 Female, age 85, right hemisphere 72.2
2521 Female, age 94, right hemisphere 61.1
Subiculum
nTPM: 230.9
2438 Female, age 94, left hemisphere 306.2
2042 Male, age 76, both hemispheres 304.8
1901 Male, age 80, both hemispheres 266.0
1977 Female, age 85, both hemispheres 205.3
2619 Male, age 74, both hemispheres 158.6
2729 Female, age 91, right hemisphere 144.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 373.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 373.4
Samples: 255

Max nTPM: 1918.3
Min nTPM: 52.3
Std nTPM: 269.1
Median nTPM: 310.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1918.3
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 1426.6
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 1410.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1334.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1320.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 1170.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1168.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1161.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1155.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1149.7
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 1003.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 274.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 274.1
FF:10153-102I9 76 years, female 292.8
FF:10169-103B7 60 years, female 255.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 134.6
Pig sample Sample description nTPM
Subiculum
nTPM: 52.1
Samples: 4

Max nTPM: 59.2
Min nTPM: 40.5
Sample A Female 59.2
Sample B Female 58.2
Sample C Male 40.5
Sample D Male 50.5
Dorsal hippocampus
nTPM: 134.6
Samples: 4

Max nTPM: 195.4
Min nTPM: 48.6
Sample A Female 189.9
Sample B Female 104.5
Sample C Male 195.4
Sample D Male 48.6
Entorhinal cortex
nTPM: 68.0
Samples: 4

Max nTPM: 81.8
Min nTPM: 56.2
Sample A Female 57.7
Sample B Female 81.8
Sample C Male 56.2
Sample D Male 76.1
Ventral hippocampus
nTPM: 74.7
Samples: 4

Max nTPM: 109.8
Min nTPM: 40.9
Sample A Female 72.5
Sample B Female 40.9
Sample C Male 75.7
Sample D Male 109.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 119.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.5
Samples: 4

Max nTPM: 111.0
Min nTPM: 101.7
Sample A Male 111.0
Sample B Male 101.7
Sample C Female 103.5
Sample D Female 101.9
Hippocampal formation
nTPM: 119.4
Samples: 4

Max nTPM: 146.9
Min nTPM: 104.3
Sample A Male 105.8
Sample B Male 104.3
Sample C Female 146.9
Sample D Female 120.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
70192081 Antisense, RP_050517_01_C01, Mouse strain C57BL/6J (56 days, male) 1.2

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