TP53INP2
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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • TP53INP2
EVOLUTIONARY HIPPOCAMPAL FORMATION Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:373.4 nTPM
HPA Brain:232.4 nTPM
GTEx:373.4 nTPM
FANTOM5:274.1 Scaled Tags Per Million
Macaque:31.6 nTPM
Mouse:108.0 nTPM
Rat:79.4 nTPM
Pig:135.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - PROTEINTALKS DB MS
Median intensity ND
Sample Intensity
Hippocampal formation_01
ND
Hippocampal formation_02
ND
Hippocampal formation_03
ND
Hippocampal formation_04
ND
Hippocampal formation_05
ND
Hippocampal formation_06
ND

HIPPOCAMPAL FORMATION - HPA Brain Stereo-seq

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.4
Sample id Sample description nTPM
Dentate gyrus
nTPM: 219.1
2530 Female, age 94, left hemisphere 495.1
2531 Female, age 67, both hemispheres 227.0
2010 Male, age 76, both hemispheres 198.2
2246 Female, age 85, both hemispheres 161.1
2528 Male, age 74, both hemispheres 133.3
1927 Female, age 91, both hemispheres 100.0
Entorhinal gyrus
nTPM: 203.4
2686 Male, age 75, right hemisphere 345.1
2117 Female, age 91, right hemisphere 236.7
2764 Male, age 80, right hemisphere 187.8
2613 Female, age 94, left hemisphere 166.7
1787 Male, age 76, left hemisphere 143.7
1938 Female, age 85, left hemisphere 140.6
Hippocampus, CA1
nTPM: 143.3
1873 Female, age 85, both hemispheres 171.3
2749 Male, age 80, left hemisphere 142.1
2082 Female, age 91, right hemisphere 141.4
2527 Male, age 74, both hemispheres 131.4
2045 Male, age 76, both hemispheres 130.1
Hippocampus, CA2
nTPM: 179.7
1963 Male, age 80, left hemisphere 253.7
2437 Female, age 94, left hemisphere 244.5
1940 Female, age 85, left hemisphere 155.6
2249 Male, age 74, both hemispheres 149.6
1892 Male, age 76, both hemispheres 139.9
2113 Female, age 91, right hemisphere 135.0
Hippocampus, CA3
nTPM: 145.4
1891 Female, age 85, both hemispheres 207.8
2861 Female, age 67, both hemispheres 183.6
1867 Male, age 76, both hemispheres 176.1
2137 Male, age 80, left hemisphere 110.0
2620 Female, age 94, left hemisphere 107.8
2436 Male, age 74, both hemispheres 87.0
Parahippocampal cortex
nTPM: 154.6
2532 Female, age 72, left hemisphere 249.3
2692 Male, age 74, both hemispheres 226.9
2622 Female, age 67, right hemisphere 207.3
2245 Female, age 91, both hemispheres 165.2
2018 Male, age 76, both hemispheres 152.3
1990 Female, age 91, right hemisphere 145.8
1933 Female, age 85, both hemispheres 118.0
1850 Male, age 80, both hemispheres 117.2
2693 Female, age 94, both hemispheres 86.6
2250 Female, age 67, right hemisphere 77.3
Perirhinal gyrus
nTPM: 80.1
2848 Male, age 76, right hemisphere 107.0
1847 Female, age 91, left hemisphere 80.9
1794 Male, age 80, right hemisphere 78.8
1841 Female, age 85, right hemisphere 72.7
2521 Female, age 94, right hemisphere 61.2
Subiculum
nTPM: 232.4
2042 Male, age 76, both hemispheres 309.9
2438 Female, age 94, left hemisphere 306.4
1901 Male, age 80, both hemispheres 267.2
1977 Female, age 85, both hemispheres 206.7
2619 Male, age 74, both hemispheres 159.5
2729 Female, age 91, right hemisphere 144.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

373.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 373.4
Samples: 255

Max nTPM: 1918.3
Min nTPM: 52.3
Std nTPM: 269.1
Median nTPM: 310.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1918.3
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 1426.6
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 1410.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1334.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1320.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 1170.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1168.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1161.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1155.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1149.7
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 1003.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 987.2
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 974.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 959.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 936.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 883.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 843.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 843.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 785.8
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 755.6
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 749.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 731.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 704.9
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 695.1
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 686.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 661.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 646.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 638.6
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 620.2
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 609.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 597.6
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 590.8
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 588.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 580.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 579.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 569.6
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 565.2
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 564.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 560.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 545.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 544.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 536.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 535.7
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 535.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 528.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 527.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 524.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 515.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 514.7
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 510.2
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 501.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 500.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 492.6
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 484.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 481.7
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 478.8
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 470.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 464.2
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 462.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 460.0
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 455.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 444.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 441.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 441.6
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 419.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 417.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 415.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 414.7
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 413.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 413.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 410.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 405.8
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 405.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 402.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 402.5
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 401.7
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 398.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 397.0
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 395.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 394.9
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 394.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 383.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 382.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 381.7
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 380.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 380.6
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 380.4
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 374.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 373.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 372.8
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 371.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 370.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 370.0
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 368.2
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 367.2
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 365.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 363.2
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 360.8
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 357.1
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 354.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 353.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 353.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 353.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 344.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 343.6
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 342.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 341.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 339.4
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 339.3
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 335.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 335.7
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 333.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 332.7
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 332.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 331.1
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 329.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 328.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 328.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 326.8
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 326.4
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 324.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 324.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 323.6
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 322.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 321.4
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 317.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 315.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 310.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 308.3
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 307.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 300.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 296.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 296.2
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 295.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 294.3
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 293.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 291.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 290.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 290.6
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 288.6
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 287.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 286.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 286.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 284.9
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 282.4
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 279.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 276.5
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 275.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 275.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 275.0
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 274.3
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 272.9
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 271.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 271.6
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 270.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 266.0
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 264.9
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 263.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 258.9
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 257.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 253.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 253.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 252.9
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 251.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 250.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 247.5
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 243.1
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 241.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 240.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 239.4
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 237.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 236.8
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 235.9
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 233.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 233.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 231.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 230.3
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 227.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 227.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 226.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 222.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 221.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 216.6
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 216.4
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 213.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 213.3
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 212.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 211.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 211.1
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 210.7
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 210.0
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 208.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 202.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 202.5
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 199.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 199.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 199.3
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 198.7
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 195.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 194.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 190.6
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 189.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 184.1
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 184.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 184.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 181.6
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 181.1
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 180.7
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 180.3
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 179.7
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 178.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 174.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 173.4
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 173.0
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 172.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 172.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 170.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 166.5
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 162.2
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 162.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 161.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 156.2
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 154.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 154.0
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 149.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 146.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 142.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 135.6
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 130.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 129.4
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 127.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 121.6
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 119.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 118.3
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 118.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 116.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 114.6
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 114.0
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 106.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 106.3
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 106.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 105.7
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 103.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 101.9
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 101.0
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 94.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 92.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 91.6
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 84.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 78.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 73.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 68.3
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 57.9
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 57.7
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 52.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

274.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 274.1
FF:10153-102I9 76 years, female 292.8
FF:10169-103B7 60 years, female 255.4

HIPPOCAMPAL FORMATION - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.6
Macaque sample Sample description nTPM
Subiculum
nTPM: 16.2
Samples: 1

Max nTPM: 16.2
Min nTPM: 16.2
Sample A 16.2
Entorhinal cortex
nTPM: 15.8
Samples: 2

Max nTPM: 16.2
Min nTPM: 15.4
Sample A 16.2
Sample B 15.4
Hippocampal formation
nTPM: 31.6
Samples: 4

Max nTPM: 39.8
Min nTPM: 23.0
Sample A 36.7
Sample B 23.0
Sample C 26.8
Sample D 39.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.0
Pig sample Sample description nTPM
Subiculum
nTPM: 52.3
Samples: 4

Max nTPM: 59.4
Min nTPM: 40.5
Sample A Female 59.4
Sample B Female 58.5
Sample C Male 40.5
Sample D Male 50.7
Dorsal hippocampus
nTPM: 135.0
Samples: 4

Max nTPM: 196.0
Min nTPM: 48.6
Sample A Female 190.6
Sample B Female 104.8
Sample C Male 196.0
Sample D Male 48.6
Entorhinal cortex
nTPM: 68.1
Samples: 4

Max nTPM: 82.0
Min nTPM: 56.5
Sample A Female 57.9
Sample B Female 82.0
Sample C Male 56.5
Sample D Male 76.1
Ventral hippocampus
nTPM: 74.9
Samples: 4

Max nTPM: 109.8
Min nTPM: 41.0
Sample A Female 72.7
Sample B Female 41.0
Sample C Male 76.1
Sample D Male 109.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.9
Samples: 4

Max nTPM: 102.1
Min nTPM: 87.9
Sample A 102.1
Sample B 97.9
Sample C 95.5
Sample D 87.9
Hippocampal formation
nTPM: 108.0
Samples: 4

Max nTPM: 125.3
Min nTPM: 95.2
Sample A 101.3
Sample B 95.2
Sample C 125.3
Sample D 110.2

HIPPOCAMPAL FORMATION - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.4
Rat sample Sample description nTPM
Entorhinal cortex
nTPM: 62.3
Samples: 4

Max nTPM: 70.6
Min nTPM: 53.7
Sample A 70.6
Sample A 69.4
Sample A 55.6
Sample B 53.7
Ventral hippocampus
nTPM: 79.5
Samples: 4

Max nTPM: 93.0
Min nTPM: 62.6
Sample A 88.2
Sample A 62.6
Sample A 74.0
Sample A 93.0

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