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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • SLC1A3
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:297.9 nTPM
GTEx:455.2 nTPM
FANTOM5:1276.5 Scaled Tags Per Million
Macaque:473.4 nTPM
Pig:917.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

297.9
Sample id Sample description nTPM
Putamen
nTPM: 297.9
2482 Female, age 94, left hemisphere 491.5
1838 Male, age 80, right hemisphere 367.9
1937 Female, age 91, right hemisphere 272.8
2647 Male, age 75, left hemisphere 254.9
2489 Female, age 72, unknown 245.4
1829 Male, age 74, unknown 236.2
2466 Female, age 79, unknown 217.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

455.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 455.2
Samples: 254

Max nTPM: 1669.9
Min nTPM: 61.1
Std nTPM: 222.4
Median nTPM: 423.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1669.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1191.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1073.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1066.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1027.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1023.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 992.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 991.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 981.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 935.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 934.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 893.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 863.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 838.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 815.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 794.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 783.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 776.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 770.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 768.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 738.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 738.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 724.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 715.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 708.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 705.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 700.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 698.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 692.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 688.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 688.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 685.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 680.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 678.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 673.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 673.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 664.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 660.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 659.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 653.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 650.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 650.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 648.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 648.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 646.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 645.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 645.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 640.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 639.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 637.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 635.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 627.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 618.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 615.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 608.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 601.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 597.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 595.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 595.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 593.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 592.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 590.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 589.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 583.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 581.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 567.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 567.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 567.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 555.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 554.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 554.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 554.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 553.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 551.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 551.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 551.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 548.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 538.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 537.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 534.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 534.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 534.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 527.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 520.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 520.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 515.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 514.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 513.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 509.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 507.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 505.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 500.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 499.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 497.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 495.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 494.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 494.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 490.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 488.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 488.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 488.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 487.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 485.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 483.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 478.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 474.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 467.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 465.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 461.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 461.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 457.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 457.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 455.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 454.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 451.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 450.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 443.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 442.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 442.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 441.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 438.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 437.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 432.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 428.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 427.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 426.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 424.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 422.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 413.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 411.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 407.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 407.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 404.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 403.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 400.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 396.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 392.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 392.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 392.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 390.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 389.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 389.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 386.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 385.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 383.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 382.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 382.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 381.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 381.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 379.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 379.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 378.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 378.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 377.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 377.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 370.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 369.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 367.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 367.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 365.4
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 363.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 363.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 357.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 357.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 354.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 353.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 349.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 347.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 346.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 345.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 341.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 339.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 337.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 337.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 335.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 333.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 333.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 329.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 327.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 327.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 324.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 324.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 321.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 320.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 310.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 309.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 306.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 305.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 305.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 295.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 288.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 287.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 284.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 284.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 284.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 283.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 282.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 278.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 278.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 277.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 272.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 270.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 270.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 270.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 268.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 267.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 262.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 262.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 260.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 259.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 256.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 252.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 252.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 252.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 249.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 249.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 247.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 245.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 239.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 236.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 228.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 228.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 226.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 225.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 223.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 223.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 217.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 210.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 206.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 205.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 204.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 203.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 201.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 199.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 199.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 198.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 196.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 192.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 181.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 170.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 154.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 145.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 132.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 125.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 122.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 118.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 109.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 98.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 97.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 81.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 80.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 79.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 79.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 61.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1276.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1276.5
FF:10176-103C5 60 years, female 1276.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

473.4
Macaque sample Sample description nTPM
Putamen
nTPM: 473.4
Samples: 2

Max nTPM: 554.6
Min nTPM: 392.2
Sample A 392.2
Sample B 554.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

917.1
Pig sample Sample description nTPM
Putamen
nTPM: 917.1
Samples: 3

Max nTPM: 1232.2
Min nTPM: 738.5
Sample B Female 780.6
Sample C Male 1232.2
Sample D Male 738.5

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