We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
XRCC5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • XRCC5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:47.5 nTPM
HPA Brain:107.3 nTPM
GTEx:47.5 nTPM
Pig:23.6 nTPM
Mouse:19.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 107.3
2226 Male, age 75, left hemisphere 129.0
1961 Female, age 42, unknown 85.5
Dorsomedial nucleus
nTPM: 91.6
2041 Female, age 72, unknown 98.8
2017 Female, age 42, unknown 88.6
1989 Male, age 62, unknown 87.3
Lateral hypothalamic area
nTPM: 105.3
2228 Male, age 66, unknown 119.7
2271 Male, age 75, both hemispheres 117.0
1791 Male, age 80, right hemisphere 108.9
2412 Male, age 62, unknown 75.4
Mammillary body
nTPM: 100.7
1923 Female, age 72, unknown 119.4
1948 Female, age 72, unknown 102.1
1945 Male, age 80, right hemisphere 99.7
2413 Male, age 66, unknown 92.2
1834 Female, age 42, unknown 89.9
Paraventricular nucleus
nTPM: 96.8
2700 Male, age 62, unknown 96.8
Preoptic area
nTPM: 94.8
1907 Male, age 80, right hemisphere 106.4
2414 Female, age 72, unknown 90.1
1861 Female, age 42, unknown 88.0
Supraoptic nucleus
nTPM: 103.3
1894 Female, age 72, unknown 118.2
2043 Male, age 62, unknown 103.8
2835 Female, age 72, unknown 87.9
Ventromedial nucleus
nTPM: 89.9
1982 Female, age 72, unknown 92.8
1822 Female, age 42, unknown 86.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 47.5
Samples: 257

Max nTPM: 76.3
Min nTPM: 33.5
Std nTPM: 6.6
Median nTPM: 46.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 76.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 74.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 66.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 65.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 62.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 62.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 61.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 60.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 60.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 60.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 59.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 59.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 59.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 59.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 59.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 58.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 57.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 57.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 57.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 57.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 56.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 56.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 56.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 56.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 55.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 55.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 55.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 55.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 55.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 55.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 55.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 54.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 54.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 54.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 54.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 54.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 54.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 54.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 53.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 53.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 53.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 53.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 53.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 53.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 53.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 53.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 53.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 53.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 53.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 52.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 52.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 52.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 52.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 52.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 52.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 52.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 52.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 51.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 51.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 51.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 51.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 51.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 51.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 51.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 51.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 51.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 51.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 51.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 51.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 51.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 51.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 51.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 51.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 51.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 51.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 50.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 50.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 50.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 50.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 50.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 50.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 50.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 50.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 49.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 49.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 49.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 49.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 49.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 49.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 49.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 49.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 49.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 49.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 49.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 49.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 48.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 48.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 48.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 48.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 48.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 48.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 48.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 48.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 48.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 48.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 48.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 48.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 48.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 48.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 48.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 48.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 47.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 47.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 47.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 47.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 47.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 47.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 47.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 47.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 47.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 47.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 47.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 47.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 47.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 47.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 47.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 47.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 46.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 46.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 46.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 46.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 46.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 46.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 46.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 46.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 46.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 46.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 46.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 46.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 46.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 46.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 46.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 46.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 46.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 46.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 46.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 46.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 46.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 46.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 46.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 45.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 45.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 45.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 45.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 45.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 45.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 45.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 45.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 45.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 45.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 45.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 45.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 45.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 45.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 45.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 44.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 44.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 44.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 44.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 44.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 44.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 44.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 44.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 44.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 44.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 44.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 44.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 44.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 43.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 43.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 43.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 43.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 43.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 43.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 43.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 43.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 43.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 43.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 43.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 43.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 42.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 42.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 42.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 42.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 42.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 42.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 42.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 42.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 42.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 42.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 42.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 42.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 42.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 42.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 41.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 41.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 41.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 41.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 41.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 41.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 41.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 41.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 41.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 41.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 41.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 41.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 40.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 40.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 40.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 40.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 40.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 40.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 40.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 40.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 40.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 40.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 40.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 40.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 39.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 39.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 39.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 39.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 39.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 39.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 38.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 38.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 38.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 38.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 38.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 38.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 38.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 38.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 38.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 38.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 38.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 37.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 37.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 37.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 37.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 37.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 36.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 36.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 35.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 35.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 35.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 35.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 33.5
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 23.6
Samples: 4

Max nTPM: 26.6
Min nTPM: 19.8
Sample A Female 26.6
Sample B Female 23.1
Sample C Male 24.9
Sample D Male 19.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 19.2
Samples: 4

Max nTPM: 19.8
Min nTPM: 18.1
Sample A Male 19.6
Sample B Male 19.8
Sample C Female 19.4
Sample D Female 18.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo