A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
17.7
nTPM
Monaco:
29.7
nTPM
Schmiedel:
17.0
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
17.7
HPA sample
nTPM
Classical monocyte nTPM: 12.6
Samples: 6
Max nTPM: 16.6
Min nTPM: 9.8
P10809_1003
12.3
P10809_1020
16.6
P10809_1039
13.6
P10809_1058
9.8
P10809_1080
9.8
P10809_1107
13.4
Intermediate monocyte nTPM: 17.7
Samples: 6
Max nTPM: 30.9
Min nTPM: 9.6
P10809_1004
20.3
P10809_1023
30.9
P10809_1042
18.3
P10809_1061
11.4
P10809_1081
9.6
P10809_1108
15.9
Non-classical monocyte nTPM: 16.2
Samples: 5
Max nTPM: 18.8
Min nTPM: 13.1
P10809_1005
17.4
P10809_1053
18.8
P10809_1072
16.5
P10809_1082
13.1
P10809_1109
15.0
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
29.7
Monaco sample
nTPM
Classical monocyte nTPM: 16.7
Samples: 4
Max nTPM: 21.6
Min nTPM: 13.5
RHH5313_R3680
13.5
RHH5221_R3593
21.6
RHH5250_R3622
16.3
RHH5279_R3651
15.5
Intermediate monocyte nTPM: 29.8
Samples: 4
Max nTPM: 32.3
Min nTPM: 25.6
RHH5314_R3681
31.6
RHH5222_R3594
25.6
RHH5251_R3623
29.5
RHH5280_R3652
32.3
Non-classical monocyte nTPM: 22.9
Samples: 4
Max nTPM: 28.2
Min nTPM: 16.1
RHH5315_R3682
28.2
RHH5223_R3595
24.4
RHH5252_R3624
22.7
RHH5281_R3653
16.1
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
17.0
Schmiedel sample id
TPM
Classical monocyte TPM: 10.1
Samples: 91
Max TPM: 15.3
Min TPM: 5.0
MONOCYTES_1
15.3
MONOCYTES_2
15.3
MONOCYTES_3
14.9
MONOCYTES_4
14.8
MONOCYTES_5
14.2
MONOCYTES_6
13.4
MONOCYTES_7
13.4
MONOCYTES_8
13.1
MONOCYTES_9
13.0
MONOCYTES_10
12.9
MONOCYTES_11
12.7
MONOCYTES_12
12.7
MONOCYTES_13
12.7
MONOCYTES_14
12.5
MONOCYTES_15
12.5
MONOCYTES_16
12.4
MONOCYTES_17
12.3
MONOCYTES_18
12.2
MONOCYTES_19
12.0
MONOCYTES_20
12.0
MONOCYTES_21
11.8
MONOCYTES_22
11.8
MONOCYTES_23
11.7
MONOCYTES_24
11.7
MONOCYTES_25
11.5
MONOCYTES_26
11.5
MONOCYTES_27
11.4
MONOCYTES_28
11.4
MONOCYTES_29
11.3
MONOCYTES_30
11.2
MONOCYTES_31
11.2
MONOCYTES_32
11.1
MONOCYTES_33
10.9
MONOCYTES_34
10.8
MONOCYTES_35
10.7
MONOCYTES_36
10.5
MONOCYTES_37
10.4
MONOCYTES_38
10.4
MONOCYTES_39
10.4
MONOCYTES_40
10.3
MONOCYTES_41
10.3
MONOCYTES_42
10.1
MONOCYTES_43
10.1
MONOCYTES_44
10.0
MONOCYTES_45
10.0
MONOCYTES_46
9.8
MONOCYTES_47
9.8
MONOCYTES_48
9.7
MONOCYTES_49
9.6
MONOCYTES_50
9.6
MONOCYTES_51
9.6
MONOCYTES_52
9.6
MONOCYTES_53
9.6
MONOCYTES_54
9.6
MONOCYTES_55
9.6
MONOCYTES_56
9.4
MONOCYTES_57
9.4
MONOCYTES_58
9.3
MONOCYTES_59
9.3
MONOCYTES_60
9.2
MONOCYTES_61
9.1
MONOCYTES_62
9.1
MONOCYTES_63
9.0
MONOCYTES_64
9.0
MONOCYTES_65
9.0
MONOCYTES_66
9.0
MONOCYTES_67
8.9
MONOCYTES_68
8.8
MONOCYTES_69
8.6
MONOCYTES_70
8.5
MONOCYTES_71
8.4
MONOCYTES_72
8.3
MONOCYTES_73
8.2
MONOCYTES_74
8.2
MONOCYTES_75
8.0
MONOCYTES_76
7.9
MONOCYTES_77
7.8
MONOCYTES_78
7.7
MONOCYTES_79
7.5
MONOCYTES_80
7.5
MONOCYTES_81
7.4
MONOCYTES_82
7.3
MONOCYTES_83
7.2
MONOCYTES_84
7.1
MONOCYTES_85
7.1
MONOCYTES_86
6.7
MONOCYTES_87
6.7
MONOCYTES_88
6.4
MONOCYTES_89
5.9
MONOCYTES_90
5.5
MONOCYTES_91
5.0
Show allShow less
Non-classical monocyte TPM: 17.0
Samples: 90
Max TPM: 26.1
Min TPM: 8.3
M2_1
26.1
M2_2
24.9
M2_3
24.2
M2_4
23.8
M2_5
23.2
M2_6
22.7
M2_7
22.5
M2_8
22.3
M2_9
22.0
M2_10
21.9
M2_11
21.9
M2_12
21.7
M2_13
21.5
M2_14
21.4
M2_15
21.4
M2_16
21.4
M2_17
21.3
M2_18
21.1
M2_19
20.9
M2_20
20.8
M2_21
20.8
M2_22
20.4
M2_23
20.2
M2_24
20.2
M2_25
19.8
M2_26
19.7
M2_27
19.6
M2_28
19.6
M2_29
19.5
M2_30
19.2
M2_31
18.9
M2_32
18.7
M2_33
18.6
M2_34
18.5
M2_35
18.2
M2_36
18.2
M2_37
18.1
M2_38
18.0
M2_39
17.9
M2_40
17.9
M2_41
17.8
M2_42
17.7
M2_43
17.5
M2_44
17.5
M2_45
17.3
M2_46
17.0
M2_47
17.0
M2_48
16.8
M2_49
16.7
M2_50
16.7
M2_51
16.6
M2_52
16.5
M2_53
16.4
M2_54
16.4
M2_55
16.3
M2_56
16.2
M2_57
16.1
M2_58
16.1
M2_59
15.9
M2_60
15.9
M2_61
15.8
M2_62
15.4
M2_63
14.8
M2_64
14.6
M2_65
14.6
M2_66
14.3
M2_67
14.3
M2_68
14.0
M2_69
13.9
M2_70
13.6
M2_71
13.5
M2_72
13.3
M2_73
12.6
M2_74
12.4
M2_75
12.4
M2_76
12.3
M2_77
12.1
M2_78
11.9
M2_79
11.1
M2_80
10.9
M2_81
10.8
M2_82
10.3
M2_83
10.3
M2_84
10.2
M2_85
9.6
M2_86
9.6
M2_87
9.2
M2_88
8.9
M2_89
8.8
M2_90
8.3
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
