A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
0.3
nTPM
Monaco:
5.0
nTPM
Schmiedel:
18.5
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
0.3
HPA sample
nTPM
Classical monocyte nTPM: 0.3
Samples: 6
Max nTPM: 0.5
Min nTPM: 0.2
P10809_1003
0.3
P10809_1020
0.2
P10809_1039
0.2
P10809_1058
0.5
P10809_1080
0.4
P10809_1107
0.4
Intermediate monocyte nTPM: 0.3
Samples: 6
Max nTPM: 0.5
Min nTPM: 0.2
P10809_1004
0.3
P10809_1023
0.2
P10809_1042
0.2
P10809_1061
0.3
P10809_1081
0.4
P10809_1108
0.5
Non-classical monocyte nTPM: 0.2
Samples: 5
Max nTPM: 0.5
Min nTPM: 0.0
P10809_1005
0.2
P10809_1053
0.2
P10809_1072
0.0
P10809_1082
0.5
P10809_1109
0.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
5.0
Monaco sample
nTPM
Classical monocyte nTPM: 4.6
Samples: 4
Max nTPM: 5.2
Min nTPM: 4.0
RHH5313_R3680
4.0
RHH5221_R3593
4.1
RHH5250_R3622
4.9
RHH5279_R3651
5.2
Intermediate monocyte nTPM: 5.0
Samples: 4
Max nTPM: 8.2
Min nTPM: 3.4
RHH5314_R3681
3.4
RHH5222_R3594
4.5
RHH5251_R3623
8.2
RHH5280_R3652
4.0
Non-classical monocyte nTPM: 4.4
Samples: 4
Max nTPM: 6.4
Min nTPM: 3.0
RHH5315_R3682
3.5
RHH5223_R3595
3.0
RHH5252_R3624
6.4
RHH5281_R3653
4.6
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
18.5
Schmiedel sample id
TPM
Classical monocyte TPM: 15.9
Samples: 91
Max TPM: 21.0
Min TPM: 11.6
MONOCYTES_1
21.0
MONOCYTES_2
20.8
MONOCYTES_3
20.5
MONOCYTES_4
20.3
MONOCYTES_5
20.2
MONOCYTES_6
20.2
MONOCYTES_7
19.8
MONOCYTES_8
19.4
MONOCYTES_9
19.3
MONOCYTES_10
18.8
MONOCYTES_11
18.8
MONOCYTES_12
18.6
MONOCYTES_13
18.5
MONOCYTES_14
18.4
MONOCYTES_15
18.4
MONOCYTES_16
18.3
MONOCYTES_17
18.2
MONOCYTES_18
18.0
MONOCYTES_19
18.0
MONOCYTES_20
17.9
MONOCYTES_21
17.7
MONOCYTES_22
17.6
MONOCYTES_23
17.5
MONOCYTES_24
17.4
MONOCYTES_25
17.4
MONOCYTES_26
17.3
MONOCYTES_27
17.3
MONOCYTES_28
17.0
MONOCYTES_29
17.0
MONOCYTES_30
16.8
MONOCYTES_31
16.8
MONOCYTES_32
16.7
MONOCYTES_33
16.6
MONOCYTES_34
16.6
MONOCYTES_35
16.5
MONOCYTES_36
16.5
MONOCYTES_37
16.4
MONOCYTES_38
16.3
MONOCYTES_39
16.3
MONOCYTES_40
16.3
MONOCYTES_41
16.0
MONOCYTES_42
15.8
MONOCYTES_43
15.7
MONOCYTES_44
15.7
MONOCYTES_45
15.7
MONOCYTES_46
15.7
MONOCYTES_47
15.6
MONOCYTES_48
15.6
MONOCYTES_49
15.5
MONOCYTES_50
15.5
MONOCYTES_51
15.4
MONOCYTES_52
15.3
MONOCYTES_53
15.2
MONOCYTES_54
15.1
MONOCYTES_55
15.1
MONOCYTES_56
15.1
MONOCYTES_57
14.9
MONOCYTES_58
14.9
MONOCYTES_59
14.8
MONOCYTES_60
14.6
MONOCYTES_61
14.4
MONOCYTES_62
14.3
MONOCYTES_63
14.2
MONOCYTES_64
14.2
MONOCYTES_65
14.2
MONOCYTES_66
14.2
MONOCYTES_67
14.1
MONOCYTES_68
14.1
MONOCYTES_69
14.1
MONOCYTES_70
14.0
MONOCYTES_71
14.0
MONOCYTES_72
13.9
MONOCYTES_73
13.9
MONOCYTES_74
13.8
MONOCYTES_75
13.8
MONOCYTES_76
13.7
MONOCYTES_77
13.7
MONOCYTES_78
13.7
MONOCYTES_79
13.6
MONOCYTES_80
13.5
MONOCYTES_81
13.3
MONOCYTES_82
13.3
MONOCYTES_83
13.2
MONOCYTES_84
13.2
MONOCYTES_85
13.1
MONOCYTES_86
13.0
MONOCYTES_87
12.9
MONOCYTES_88
12.8
MONOCYTES_89
12.7
MONOCYTES_90
12.3
MONOCYTES_91
11.6
Show allShow less
Non-classical monocyte TPM: 18.5
Samples: 90
Max TPM: 26.5
Min TPM: 10.7
M2_1
26.5
M2_2
26.1
M2_3
26.1
M2_4
25.9
M2_5
25.4
M2_6
23.4
M2_7
23.2
M2_8
22.4
M2_9
22.0
M2_10
21.8
M2_11
21.8
M2_12
21.5
M2_13
21.5
M2_14
21.2
M2_15
21.2
M2_16
21.1
M2_17
20.9
M2_18
20.8
M2_19
20.7
M2_20
20.5
M2_21
20.4
M2_22
20.3
M2_23
20.2
M2_24
20.2
M2_25
20.1
M2_26
20.1
M2_27
20.1
M2_28
20.0
M2_29
19.9
M2_30
19.9
M2_31
19.7
M2_32
19.7
M2_33
19.6
M2_34
19.6
M2_35
19.6
M2_36
19.1
M2_37
19.1
M2_38
19.1
M2_39
18.9
M2_40
18.8
M2_41
18.7
M2_42
18.6
M2_43
18.6
M2_44
18.6
M2_45
18.6
M2_46
18.3
M2_47
18.2
M2_48
18.1
M2_49
18.1
M2_50
18.1
M2_51
17.9
M2_52
17.8
M2_53
17.8
M2_54
17.6
M2_55
17.5
M2_56
17.5
M2_57
17.3
M2_58
17.2
M2_59
17.2
M2_60
17.2
M2_61
17.1
M2_62
17.0
M2_63
17.0
M2_64
16.9
M2_65
16.7
M2_66
16.7
M2_67
16.7
M2_68
16.5
M2_69
16.5
M2_70
16.4
M2_71
16.4
M2_72
16.4
M2_73
16.2
M2_74
15.8
M2_75
15.5
M2_76
15.5
M2_77
15.5
M2_78
15.4
M2_79
15.4
M2_80
15.3
M2_81
14.9
M2_82
14.6
M2_83
14.5
M2_84
14.5
M2_85
14.1
M2_86
14.0
M2_87
13.7
M2_88
13.5
M2_89
12.5
M2_90
10.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
