HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:24.7 nTPM
HPA Brain:243.1 nTPM
GTEx:24.7 nTPM
FANTOM5:124.9 Scaled Tags Per Million
Mouse:119.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029981Antibody CAB037276
Glial cells MediumLow
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 243.1
Sample id Sample description nTPM
Hippocampus
nTPM: 207.5
2529 Female, age 94, left hemisphere 264.3
2148 Female, age 91, left hemisphere 230.7
1855 Male, age 76, left hemisphere 225.9
1911 Female, age 85, right hemisphere 188.3
2621 Female, age 67, right hemisphere 168.8
1898 Male, age 80, left hemisphere 167.1
Dentate gyrus
nTPM: 217.4
1927 Female, age 91, both hemispheres 236.0
2530 Female, age 94, left hemisphere 225.2
2531 Female, age 67, both hemispheres 214.2
2010 Male, age 76, both hemispheres 213.5
2246 Female, age 85, both hemispheres 211.0
2528 Male, age 74, both hemispheres 204.4
Entorhinal gyrus
nTPM: 241.9
1787 Male, age 76, left hemisphere 270.0
2117 Female, age 91, right hemisphere 258.2
2686 Male, age 75, right hemisphere 250.3
2764 Male, age 80, right hemisphere 241.0
1938 Female, age 85, left hemisphere 236.0
2613 Female, age 94, left hemisphere 195.6
Hippocampus, CA1
nTPM: 225.2
2082 Female, age 91, right hemisphere 255.2
2527 Male, age 74, both hemispheres 238.7
2045 Male, age 76, both hemispheres 231.0
1873 Female, age 85, both hemispheres 207.6
2749 Male, age 80, left hemisphere 193.6
Hippocampus, CA2
nTPM: 211.4
2113 Female, age 91, right hemisphere 248.3
1940 Female, age 85, left hemisphere 228.4
1892 Male, age 76, both hemispheres 220.0
2437 Female, age 94, left hemisphere 204.4
1963 Male, age 80, left hemisphere 188.6
2249 Male, age 74, both hemispheres 178.8
Hippocampus, CA3
nTPM: 223.7
2620 Female, age 94, left hemisphere 281.7
2861 Female, age 67, both hemispheres 248.2
1867 Male, age 76, both hemispheres 225.6
1891 Female, age 85, both hemispheres 224.5
2436 Male, age 74, both hemispheres 211.2
2137 Male, age 80, left hemisphere 151.2
Parahippocampal cortex
nTPM: 225.0
2622 Female, age 67, right hemisphere 271.4
2250 Female, age 67, right hemisphere 271.1
1933 Female, age 85, both hemispheres 240.4
2018 Male, age 76, both hemispheres 229.9
2692 Male, age 74, both hemispheres 219.3
1990 Female, age 91, right hemisphere 218.0
2245 Female, age 91, both hemispheres 214.5
2693 Female, age 94, both hemispheres 202.6
1850 Male, age 80, both hemispheres 197.9
2532 Female, age 72, left hemisphere 184.6
Perirhinal gyrus
nTPM: 243.1
1841 Female, age 85, right hemisphere 269.2
1847 Female, age 91, left hemisphere 266.6
1794 Male, age 80, right hemisphere 244.1
2848 Male, age 76, right hemisphere 229.7
2521 Female, age 94, right hemisphere 205.7
Subiculum
nTPM: 224.2
1977 Female, age 85, both hemispheres 286.4
2619 Male, age 74, both hemispheres 276.3
2729 Female, age 91, right hemisphere 251.2
2042 Male, age 76, both hemispheres 233.2
1901 Male, age 80, both hemispheres 159.7
2438 Female, age 94, left hemisphere 138.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.7
Samples: 255

Max nTPM: 63.9
Min nTPM: 4.9
Std nTPM: 11.0
Median nTPM: 22.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 63.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 58.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.5
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 55.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 51.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 50.1
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 49.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 49.5
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 48.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 48.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 48.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 124.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 124.9
FF:10153-102I9 76 years, female 132.5
FF:10169-103B7 60 years, female 117.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 119.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 119.8
Samples: 4

Max nTPM: 135.8
Min nTPM: 111.7
Sample A Male 112.0
Sample B Male 119.5
Sample C Female 111.7
Sample D Female 135.8
Hippocampal formation
nTPM: 105.8
Samples: 4

Max nTPM: 112.3
Min nTPM: 95.9
Sample A Male 105.3
Sample B Male 109.6
Sample C Female 112.3
Sample D Female 95.9

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo