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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • HSP90AA1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:642.7 nTPM
GTEx:558.8 nTPM
FANTOM5:1663.2 Scaled Tags Per Million
Macaque:647.9 nTPM
Pig:1066.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

642.7
Sample id Sample description nTPM
Putamen
nTPM: 642.7
2482 Female, age 94, left hemisphere 882.2
2466 Female, age 79, unknown 736.6
1829 Male, age 74, unknown 696.8
1937 Female, age 91, right hemisphere 661.4
1838 Male, age 80, right hemisphere 587.8
2647 Male, age 75, left hemisphere 544.0
2489 Female, age 72, unknown 390.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

558.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 558.8
Samples: 254

Max nTPM: 1929.0
Min nTPM: 246.6
Std nTPM: 244.7
Median nTPM: 492.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1929.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1645.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1557.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1470.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1459.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1433.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1406.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1383.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1339.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1115.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1083.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1078.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1057.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1034.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 1007.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 994.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 984.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 934.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 896.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 893.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 893.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 891.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 891.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 881.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 874.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 870.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 869.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 850.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 821.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 769.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 753.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 748.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 726.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 710.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 705.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 702.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 693.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 691.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 690.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 687.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 686.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 682.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 681.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 668.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 666.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 662.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 655.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 643.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 642.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 641.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 638.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 633.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 633.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 632.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 624.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 624.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 624.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 621.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 621.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 618.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 611.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 606.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 606.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 606.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 598.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 597.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 594.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 593.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 583.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 582.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 582.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 582.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 581.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 575.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 575.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 566.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 563.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 562.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 560.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 555.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 555.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 555.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 552.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 549.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 549.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 546.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 545.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 542.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 541.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 540.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 540.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 540.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 536.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 535.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 534.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 529.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 528.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 527.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 527.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 526.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 521.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 520.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 520.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 520.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 520.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 520.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 519.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 518.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 518.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 517.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 517.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 516.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 515.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 513.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 511.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 509.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 508.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 506.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 504.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 504.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 501.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 499.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 499.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 495.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 495.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 494.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 492.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 491.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 490.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 488.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 488.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 484.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 484.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 484.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 480.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 480.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 479.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 478.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 477.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 476.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 476.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 476.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 475.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 474.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 474.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 473.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 472.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 471.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 462.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 458.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 457.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 456.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 456.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 456.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 456.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 455.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 454.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 453.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 452.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 451.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 451.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 451.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 450.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 449.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 447.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 447.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 445.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 445.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 444.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 442.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 440.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 434.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 433.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 432.9
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 432.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 431.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 430.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 429.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 427.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 427.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 425.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 425.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 424.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 423.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 421.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 420.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 419.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 417.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 416.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 414.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 413.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 413.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 412.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 410.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 410.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 409.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 409.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 408.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 408.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 408.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 407.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 405.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 405.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 404.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 403.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 402.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 402.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 400.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 399.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 394.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 394.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 394.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 392.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 391.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 390.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 390.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 389.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 387.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 386.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 384.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 384.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 383.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 382.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 380.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 376.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 372.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 371.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 370.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 370.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 365.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 359.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 358.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 357.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 356.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 355.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 354.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 352.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 348.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 344.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 343.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 342.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 342.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 338.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 335.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 332.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 330.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 327.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 326.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 325.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 322.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 319.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 298.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 281.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 246.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1663.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1663.2
FF:10176-103C5 60 years, female 1663.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

647.9
Macaque sample Sample description nTPM
Putamen
nTPM: 647.9
Samples: 2

Max nTPM: 785.6
Min nTPM: 510.2
Sample A 510.2
Sample B 785.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1066.7
Pig sample Sample description nTPM
Putamen
nTPM: 1066.7
Samples: 3

Max nTPM: 1275.1
Min nTPM: 867.1
Sample B Female 867.1
Sample C Male 1275.1
Sample D Male 1058.0

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