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BETA
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  • CXCL2
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:1.1 nTPM
Monaco:842.6 nTPM
Schmiedel:257.4 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

1.1
HPA sample nTPM
Classical monocyte
nTPM: 0.2
Samples: 6

Max nTPM: 0.4
Min nTPM: 0.0
P10809_1003 0.0
P10809_1020 0.0
P10809_1039 0.3
P10809_1058 0.1
P10809_1080 0.4
P10809_1107 0.2
Intermediate monocyte
nTPM: 1.1
Samples: 6

Max nTPM: 3.2
Min nTPM: 0.0
P10809_1004 0.1
P10809_1023 3.2
P10809_1042 1.6
P10809_1061 0.0
P10809_1081 1.6
P10809_1108 0.1
Non-classical monocyte
nTPM: 1.2
Samples: 5

Max nTPM: 2.8
Min nTPM: 0.0
P10809_1005 0.6
P10809_1053 2.8
P10809_1072 0.0
P10809_1082 1.4
P10809_1109 1.0

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

842.6
Monaco sample nTPM
Classical monocyte
nTPM: 842.6
Samples: 4

Max nTPM: 1551.0
Min nTPM: 138.9
RHH5313_R3680 138.9
RHH5221_R3593 1551.0
RHH5250_R3622 1509.0
RHH5279_R3651 171.6
Intermediate monocyte
nTPM: 283.9
Samples: 4

Max nTPM: 502.7
Min nTPM: 79.3
RHH5314_R3681 114.9
RHH5222_R3594 438.7
RHH5251_R3623 502.7
RHH5280_R3652 79.3
Non-classical monocyte
nTPM: 214.1
Samples: 4

Max nTPM: 434.2
Min nTPM: 38.0
RHH5315_R3682 46.1
RHH5223_R3595 434.2
RHH5252_R3624 338.1
RHH5281_R3653 38.0

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

257.4
Schmiedel sample id TPM
Classical monocyte
TPM: 257.4
Samples: 91

Max TPM: 868.6
Min TPM: 42.5
MONOCYTES_1 868.6
MONOCYTES_2 794.4
MONOCYTES_3 763.8
MONOCYTES_4 760.5
MONOCYTES_5 575.7
MONOCYTES_6 560.7
MONOCYTES_7 533.2
MONOCYTES_8 530.2
MONOCYTES_9 527.5
MONOCYTES_10 525.1
MONOCYTES_11 465.4
MONOCYTES_12 461.7
MONOCYTES_13 454.3
MONOCYTES_14 453.1
MONOCYTES_15 450.5
MONOCYTES_16 406.3
MONOCYTES_17 401.9
MONOCYTES_18 399.0
MONOCYTES_19 394.8
MONOCYTES_20 368.1
MONOCYTES_21 333.7
MONOCYTES_22 310.0
MONOCYTES_23 308.9
MONOCYTES_24 303.1
MONOCYTES_25 302.8
MONOCYTES_26 295.3
MONOCYTES_27 284.5
MONOCYTES_28 280.6
MONOCYTES_29 275.3
MONOCYTES_30 272.0
MONOCYTES_31 267.2
MONOCYTES_32 265.8
MONOCYTES_33 261.5
MONOCYTES_34 258.7
MONOCYTES_35 258.4
MONOCYTES_36 240.0
MONOCYTES_37 238.3
MONOCYTES_38 233.3
MONOCYTES_39 231.8
MONOCYTES_40 228.4
MONOCYTES_41 225.8
MONOCYTES_42 217.0
MONOCYTES_43 216.9
MONOCYTES_44 214.4
MONOCYTES_45 210.4
MONOCYTES_46 206.6
MONOCYTES_47 204.1
MONOCYTES_48 203.0
MONOCYTES_49 202.5
MONOCYTES_50 202.3
MONOCYTES_51 200.1
MONOCYTES_52 199.2
MONOCYTES_53 193.1
MONOCYTES_54 185.1
MONOCYTES_55 183.6
MONOCYTES_56 180.8
MONOCYTES_57 178.4
MONOCYTES_58 174.0
MONOCYTES_59 172.6
MONOCYTES_60 170.9
MONOCYTES_61 167.5
MONOCYTES_62 166.5
MONOCYTES_63 165.6
MONOCYTES_64 163.7
MONOCYTES_65 153.7
MONOCYTES_66 152.5
MONOCYTES_67 148.0
MONOCYTES_68 143.8
MONOCYTES_69 142.7
MONOCYTES_70 136.9
MONOCYTES_71 129.4
MONOCYTES_72 121.9
MONOCYTES_73 110.4
MONOCYTES_74 107.3
MONOCYTES_75 105.3
MONOCYTES_76 103.0
MONOCYTES_77 97.3
MONOCYTES_78 97.1
MONOCYTES_79 93.1
MONOCYTES_80 83.5
MONOCYTES_81 82.1
MONOCYTES_82 81.9
MONOCYTES_83 79.5
MONOCYTES_84 78.7
MONOCYTES_85 77.9
MONOCYTES_86 77.8
MONOCYTES_87 65.5
MONOCYTES_88 58.2
MONOCYTES_89 54.7
MONOCYTES_90 53.4
MONOCYTES_91 42.5
Show allShow less
Non-classical monocyte
TPM: 10.5
Samples: 90

Max TPM: 33.6
Min TPM: 1.7
M2_1 33.6
M2_2 24.8
M2_3 23.7
M2_4 23.4
M2_5 22.2
M2_6 21.6
M2_7 21.0
M2_8 20.8
M2_9 19.6
M2_10 19.1
M2_11 18.2
M2_12 16.4
M2_13 16.4
M2_14 15.7
M2_15 15.4
M2_16 15.2
M2_17 14.1
M2_18 14.0
M2_19 13.7
M2_20 13.6
M2_21 12.9
M2_22 12.7
M2_23 12.6
M2_24 12.6
M2_25 12.3
M2_26 12.1
M2_27 12.1
M2_28 12.1
M2_29 12.1
M2_30 12.0
M2_31 11.2
M2_32 11.1
M2_33 10.9
M2_34 10.5
M2_35 10.5
M2_36 10.5
M2_37 10.4
M2_38 10.1
M2_39 10.0
M2_40 10.0
M2_41 9.9
M2_42 9.8
M2_43 9.7
M2_44 9.6
M2_45 9.5
M2_46 9.4
M2_47 9.3
M2_48 8.9
M2_49 8.8
M2_50 8.4
M2_51 8.4
M2_52 8.2
M2_53 8.1
M2_54 7.9
M2_55 7.9
M2_56 7.6
M2_57 7.6
M2_58 7.5
M2_59 7.4
M2_60 7.3
M2_61 7.1
M2_62 7.1
M2_63 7.1
M2_64 7.0
M2_65 7.0
M2_66 6.7
M2_67 6.6
M2_68 6.4
M2_69 6.3
M2_70 6.2
M2_71 6.2
M2_72 6.1
M2_73 6.0
M2_74 6.0
M2_75 5.9
M2_76 5.8
M2_77 5.8
M2_78 5.4
M2_79 5.3
M2_80 5.2
M2_81 5.0
M2_82 4.9
M2_83 4.8
M2_84 4.1
M2_85 3.8
M2_86 3.5
M2_87 3.5
M2_88 2.6
M2_89 2.1
M2_90 1.7
Show allShow less

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