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BETA
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  • STK17B
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:113.4 nTPM
Monaco:746.4 nTPM
Schmiedel:550.5 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

113.4
HPA sample nTPM
Classical monocyte
nTPM: 74.3
Samples: 6

Max nTPM: 103.9
Min nTPM: 54.1
P10809_1003 69.7
P10809_1020 54.1
P10809_1039 71.0
P10809_1058 74.6
P10809_1080 103.9
P10809_1107 72.3
Intermediate monocyte
nTPM: 81.3
Samples: 6

Max nTPM: 98.4
Min nTPM: 68.8
P10809_1004 88.1
P10809_1023 75.9
P10809_1042 98.4
P10809_1061 75.4
P10809_1081 68.8
P10809_1108 81.0
Non-classical monocyte
nTPM: 113.4
Samples: 5

Max nTPM: 135.6
Min nTPM: 94.3
P10809_1005 94.3
P10809_1053 135.5
P10809_1072 135.6
P10809_1082 98.3
P10809_1109 103.3

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

746.4
Monaco sample nTPM
Classical monocyte
nTPM: 639.2
Samples: 4

Max nTPM: 708.6
Min nTPM: 564.7
RHH5313_R3680 682.6
RHH5221_R3593 601.0
RHH5250_R3622 564.7
RHH5279_R3651 708.6
Intermediate monocyte
nTPM: 549.1
Samples: 4

Max nTPM: 571.6
Min nTPM: 518.2
RHH5314_R3681 518.2
RHH5222_R3594 551.8
RHH5251_R3623 554.9
RHH5280_R3652 571.6
Non-classical monocyte
nTPM: 746.4
Samples: 4

Max nTPM: 899.5
Min nTPM: 633.9
RHH5315_R3682 633.9
RHH5223_R3595 899.5
RHH5252_R3624 707.6
RHH5281_R3653 744.5

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

550.5
Schmiedel sample id TPM
Classical monocyte
TPM: 550.5
Samples: 91

Max TPM: 751.0
Min TPM: 371.3
MONOCYTES_1 751.0
MONOCYTES_2 739.0
MONOCYTES_3 730.0
MONOCYTES_4 728.8
MONOCYTES_5 713.9
MONOCYTES_6 697.8
MONOCYTES_7 690.4
MONOCYTES_8 689.1
MONOCYTES_9 682.1
MONOCYTES_10 667.3
MONOCYTES_11 660.1
MONOCYTES_12 656.3
MONOCYTES_13 653.6
MONOCYTES_14 639.6
MONOCYTES_15 636.6
MONOCYTES_16 630.4
MONOCYTES_17 623.9
MONOCYTES_18 622.1
MONOCYTES_19 619.9
MONOCYTES_20 616.7
MONOCYTES_21 612.1
MONOCYTES_22 610.5
MONOCYTES_23 609.2
MONOCYTES_24 608.6
MONOCYTES_25 607.5
MONOCYTES_26 603.4
MONOCYTES_27 602.4
MONOCYTES_28 602.1
MONOCYTES_29 597.4
MONOCYTES_30 595.6
MONOCYTES_31 594.8
MONOCYTES_32 583.3
MONOCYTES_33 576.8
MONOCYTES_34 575.0
MONOCYTES_35 573.5
MONOCYTES_36 572.3
MONOCYTES_37 568.6
MONOCYTES_38 561.7
MONOCYTES_39 560.1
MONOCYTES_40 559.7
MONOCYTES_41 559.3
MONOCYTES_42 552.4
MONOCYTES_43 550.4
MONOCYTES_44 550.1
MONOCYTES_45 548.7
MONOCYTES_46 546.0
MONOCYTES_47 537.4
MONOCYTES_48 531.0
MONOCYTES_49 530.8
MONOCYTES_50 530.1
MONOCYTES_51 529.5
MONOCYTES_52 529.0
MONOCYTES_53 527.3
MONOCYTES_54 526.6
MONOCYTES_55 526.2
MONOCYTES_56 524.2
MONOCYTES_57 523.3
MONOCYTES_58 522.9
MONOCYTES_59 520.2
MONOCYTES_60 519.9
MONOCYTES_61 507.1
MONOCYTES_62 505.3
MONOCYTES_63 496.4
MONOCYTES_64 494.1
MONOCYTES_65 486.4
MONOCYTES_66 486.3
MONOCYTES_67 486.3
MONOCYTES_68 481.5
MONOCYTES_69 481.5
MONOCYTES_70 480.9
MONOCYTES_71 480.0
MONOCYTES_72 478.0
MONOCYTES_73 477.6
MONOCYTES_74 476.2
MONOCYTES_75 475.8
MONOCYTES_76 468.5
MONOCYTES_77 462.8
MONOCYTES_78 459.8
MONOCYTES_79 457.3
MONOCYTES_80 455.3
MONOCYTES_81 446.1
MONOCYTES_82 443.6
MONOCYTES_83 430.2
MONOCYTES_84 425.5
MONOCYTES_85 424.8
MONOCYTES_86 423.2
MONOCYTES_87 420.1
MONOCYTES_88 413.5
MONOCYTES_89 396.3
MONOCYTES_90 391.0
MONOCYTES_91 371.3
Show allShow less
Non-classical monocyte
TPM: 529.4
Samples: 90

Max TPM: 1074.8
Min TPM: 344.1
M2_1 1074.8
M2_2 837.8
M2_3 774.7
M2_4 711.0
M2_5 695.0
M2_6 682.9
M2_7 675.7
M2_8 667.7
M2_9 655.1
M2_10 652.6
M2_11 651.0
M2_12 650.7
M2_13 640.2
M2_14 633.6
M2_15 629.6
M2_16 624.2
M2_17 622.5
M2_18 621.8
M2_19 620.0
M2_20 615.6
M2_21 615.3
M2_22 607.7
M2_23 605.3
M2_24 603.5
M2_25 595.0
M2_26 588.6
M2_27 585.4
M2_28 581.3
M2_29 580.1
M2_30 578.2
M2_31 572.6
M2_32 572.0
M2_33 560.3
M2_34 558.5
M2_35 557.3
M2_36 557.1
M2_37 554.6
M2_38 552.7
M2_39 551.2
M2_40 548.3
M2_41 545.7
M2_42 534.5
M2_43 532.9
M2_44 531.2
M2_45 529.0
M2_46 526.9
M2_47 526.7
M2_48 523.9
M2_49 520.4
M2_50 517.2
M2_51 512.9
M2_52 497.6
M2_53 495.8
M2_54 490.1
M2_55 489.6
M2_56 487.9
M2_57 484.7
M2_58 483.4
M2_59 483.3
M2_60 481.1
M2_61 480.8
M2_62 472.4
M2_63 470.6
M2_64 465.3
M2_65 461.2
M2_66 451.8
M2_67 439.6
M2_68 438.7
M2_69 421.0
M2_70 418.1
M2_71 415.0
M2_72 413.9
M2_73 412.5
M2_74 411.7
M2_75 403.7
M2_76 401.2
M2_77 393.9
M2_78 391.6
M2_79 388.4
M2_80 386.1
M2_81 383.5
M2_82 382.0
M2_83 380.9
M2_84 374.6
M2_85 373.1
M2_86 362.6
M2_87 353.9
M2_88 349.3
M2_89 347.8
M2_90 344.1
Show allShow less

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