Expression of RNF13 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

RNF13 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 23.99

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

RNA samplesⁱ

Average pTPM

29.4

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	108.1
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	86.8
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	74.5
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	71.6
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	67.2
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	66.2
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	64.7
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	61.6
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	59.3
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	58.4
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	58.3
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	57.7
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	57.2
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	55.1
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	54.8
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	54.7
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	54.0
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	52.9
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	52.4
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	52.4
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	51.8
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	50.2
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	50.2
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	49.9
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	49.8
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	48.2
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	48.1
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	47.8
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	47.6
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	47.4
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	47.3
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	47.2
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	46.6
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	46.4
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	46.3
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	45.3
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	45.0
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	44.9
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	44.9
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	44.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	44.5
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	44.3
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	44.1
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	43.7
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	43.4
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	43.3
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	42.7
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	42.7
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	42.6
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	42.1
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	41.9
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	41.4
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	41.4
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	40.8
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	40.7
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	40.1
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	40.0
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	39.7
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	39.7
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	39.7
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	39.6
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	39.4
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	39.3
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	39.2
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	39.0
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	38.9
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	38.9
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	38.9
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	38.8
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	38.5
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	38.4
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	38.2
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	38.0
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	37.6
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	37.3
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	37.2
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	37.1
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	37.0
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	37.0
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	36.6
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	36.1
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	36.1
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	36.1
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	36.0
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	35.9
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	35.8
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	35.7
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	35.6
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	35.4
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	35.3
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	35.2
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	35.1
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	35.1
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	34.8
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	34.8
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	34.7
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	34.7
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	34.6
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	34.4
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	34.2
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	34.1
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	34.0
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	33.7
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	33.6
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	33.5
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	33.5
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	33.4
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	33.0
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	32.9
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	32.9
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	32.9
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	32.7
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	32.7
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	32.7
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	32.6
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	32.6
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	32.4
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	32.4
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	32.3
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	32.2
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	32.1
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	32.1
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	32.0
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	32.0
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	31.9
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	31.9
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	31.8
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	31.7
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	31.6
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	31.5
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	31.4
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	31.2
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	31.1
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	30.9
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	30.8
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	30.6
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	30.5
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	30.5
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	30.4
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	30.4
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	30.4
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	30.2
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	30.2
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	30.2
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	30.0
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	29.9
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	29.7
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	29.7
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	29.5
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	29.5
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	29.5
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	29.5
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	29.4
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	29.3
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	29.2
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	29.0
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	28.9
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	28.9
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	28.7
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	28.7
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	28.7
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	28.6
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	28.5
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	28.5
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	28.4
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	28.4
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	28.3
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	28.1
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	28.0
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	28.0
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	28.0
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	27.9
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	27.8
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	27.7
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	27.6
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	27.6
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	27.5
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	27.5
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	27.4
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	27.4
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	27.3
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	27.3
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	27.3
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	27.2
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	27.2
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	27.2
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	27.1
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	27.1
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	27.0
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	26.9
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	26.9
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	26.9
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	26.8
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	26.8
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	26.7
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	26.5
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	26.4
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	26.4
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	26.3
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	26.2
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	26.1
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	26.1
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	26.1
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	26.0
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	25.9
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	25.9
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	25.8
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	25.7
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	25.7
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	25.5
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	25.4
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	25.3
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	25.2
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	25.1
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	25.1
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	25.1
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	25.0
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	24.6
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	24.6
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	24.6
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	24.6
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	24.5
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	24.5
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	24.4
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	24.2
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	24.0
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	24.0
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	24.0
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	24.0
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	23.9
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	23.9
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	23.8
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	23.8
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	23.8
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	23.7
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	23.6
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	23.5
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	23.5
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	23.4
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	23.4
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	23.4
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	23.3
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	23.3
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	23.2
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	23.1
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	23.0
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	23.0
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	22.9
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	22.9
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	22.8
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	22.8
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	22.6
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	22.4
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	22.3
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	22.2
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	22.2
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	22.0
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	22.0
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	22.0
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	22.0
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	21.9
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	21.8
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	21.8
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	21.8
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	21.6
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	21.6
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	21.5
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	21.5
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	21.4
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	21.3
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	21.3
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	21.2
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	21.1
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	21.1
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	21.1
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	21.1
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	21.0
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	21.0
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	20.9
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	20.9
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	20.9
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	20.9
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	20.7
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	20.6
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	20.2
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	20.2
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	20.1
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	20.0
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	19.9
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	19.8
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	19.7
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	19.5
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	19.5
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	19.5
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	19.4
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	19.3
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	19.1
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	19.1
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	19.1
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	18.9
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	18.9
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	18.8
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	18.7
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	18.5
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	18.4
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	18.4
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	18.4
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	18.3
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	18.3
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	18.2
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	18.2
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	18.0
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	17.9
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	17.7
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	17.7
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	17.4
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	17.3
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	17.3
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	17.2
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	17.0
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	16.9
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	16.9
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	16.7
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	16.5
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	16.3
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	16.3
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	15.7
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	15.4
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	15.4
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	15.0
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	15.0
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	15.0
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	14.7
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	14.6
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	14.5
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	14.3
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	13.5
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	13.4
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	13.3
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	13.0
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	12.7
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	12.6
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	12.4
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	12.4
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	12.2
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	12.0
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	11.7
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	11.3
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	11.1
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	11.1
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	10.6
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	10.2
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	9.6
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	9.4
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	9.2
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	9.1
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	8.8
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	7.0
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	6.5
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	6.4
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	5.5
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	3.2
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

RNF13 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 37.7

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

RNA samplesⁱ

Average pTPM

41.0

Number of samples

231

Samples

Sample	Description	pTPM
DO23523	52 years, male, NA, stage:3, alive, 1080 days	237.2
DO23547	74 years, male, NA, stage:1, alive, 1020 days	124.2
DO45127	73 years, male, NA, stage:3, dead, 420 days	97.4
DO48720	62 years, female, NA, stage:2, alive, 570 days	90.4
DO45279	67 years, male, NA, stage:3, alive, 1290 days	86.6
DO45277	64 years, male, NA, stage:3, alive, 600 days	84.4
DO23535	67 years, male, NA, stage:1, alive, 960 days	83.8
DO45283	60 years, male, NA, stage:3, alive, 510 days	72.3
DO45303	62 years, female, NA, stage:3, alive, 990 days	72.2
DO45205	67 years, female, NA, stage:2, dead, 90 days	70.1
DO45185	89 years, male, NA, stage:2, alive, 600 days	67.4
DO23509	60 years, male, NA, stage:3, dead, 780 days	67.0
DO45223	67 years, male, NA, stage:4, alive, 1020 days	63.8
DO45119	74 years, male, NA, stage:3, dead, 510 days	63.1
DO45207	68 years, male, NA, stage:1, alive, 1050 days	62.8
DO50778	60 years, male, NA, stage:4, alive, 630 days	61.8
DO45225	69 years, male, NA, stage:1, alive, 1050 days	60.8
DO23552	80 years, female, NA, stage:1, alive, 810 days	60.2
DO45197	51 years, male, NA, stage:2, alive, 1170 days	59.0
DO45231	84 years, male, NA, stage:2, alive, 930 days	58.6
DO45227	57 years, female, NA, stage:2, alive, 1020 days	58.3
DO50832	73 years, male, NA, stage:3, alive, 90 days	58.2
DO48732	73 years, male, NA, stage:3, alive, 630 days	58.2
DO23510	80 years, female, NA, stage:2, alive, 870 days	56.7
DO45139	63 years, male, NA, stage:3, alive, 1320 days	56.6
DO50829	78 years, male, NA, stage:3, alive, 570 days	56.5
DO45183	72 years, female, NA, stage:2, dead, 570 days	56.3
DO45141	73 years, male, NA, stage:2, alive, 1320 days	56.2
DO23530	53 years, male, NA, stage:4, dead, 180 days	56.1
DO45155	69 years, male, NA, stage:2, alive, 2160 days	54.8
DO45189	85 years, female, NA, stage:2, alive, 1200 days	54.8
DO23533	61 years, male, NA, stage:2, alive, 900 days	54.6
DO45163	76 years, male, NA, stage:2, alive, 960 days	54.4
DO45299	70 years, female, NA, stage:1, alive, 1440 days	54.3
DO50850	74 years, male, NA, stage:3, alive, 720 days	54.2
DO23524	71 years, female, NA, stage:2, alive, 1050 days	54.0
DO45287	74 years, male, NA, stage:1, alive, 390 days	53.6
DO23514	64 years, male, NA, stage:2, alive, 1290 days	53.3
DO48672	81 years, male, NA, stage:2, alive, 450 days	52.9
DO48728	74 years, female, NA, stage:2, alive, 150 days	52.7
DO45275	65 years, male, NA, stage:3, dead, 10 days	52.6
DO45137	38 years, male, NA, stage:1, alive, 1320 days	51.8
DO45251	57 years, female, NA, stage:2, alive, 900 days	51.5
DO50820	77 years, female, NA, stage:3, alive, 510 days	51.3
DO50789	73 years, female, NA, stage:2, alive, 570 days	50.8
DO48704	68 years, female, NA, stage:3, alive, 750 days	50.8
DO48727	81 years, female, NA, stage:2, dead, 390 days	50.5
DO45219	78 years, male, NA, stage:2, alive, 1080 days	50.4
DO45179	78 years, female, NA, stage:2, alive, 600 days	50.2
DO45131	53 years, male, NA, stage:4, dead, 360 days	50.1
DO45187	32 years, female, NA, stage:1, alive, 1260 days	49.8
DO45297	61 years, female, NA, stage:4, dead, 1260 days	49.3
DO45213	58 years, male, NA, stage:1, alive, 1200 days	49.0
DO45135	77 years, male, NA, stage:1, alive, 1410 days	49.0
DO23531	78 years, female, NA, stage:3, alive, 900 days	48.6
DO23537	79 years, male, NA, stage:2, dead, 900 days	48.4
DO23542	66 years, male, NA, stage:3, alive, 960 days	48.3
DO45239	42 years, male, NA, stage:2, alive, 870 days	48.1
DO45247	31 years, female, NA, stage:2, alive, 210 days	48.0
DO45097	69 years, male, NA, stage:3, alive, 1620 days	48.0
DO23536	56 years, male, NA, stage:2, alive, 930 days	47.9
DO45301	56 years, male, NA, stage:2, dead, 1440 days	46.9
DO45259	65 years, male, NA, stage:3, alive, 330 days	46.7
DO50809	56 years, male, NA, stage:3, dead, 720 days	46.6
DO45169	74 years, male, NA, stage:3, alive, 1350 days	46.5
DO227801	77 years, female, NA, stage:1, alive, 660 days	46.2
DO45249	57 years, male, NA, stage:1, alive, 630 days	45.8
DO45191	61 years, female, NA, stage:2, alive, 1200 days	45.8
DO45263	67 years, male, NA, stage:3, dead, 270 days	45.8
DO45211	76 years, male, NA, stage:3, alive, 240 days	45.5
DO45159	65 years, male, NA, stage:3, alive, 1470 days	45.4
DO45157	62 years, male, NA, stage:2, alive, 1980 days	45.4
DO45193	68 years, female, NA, stage:4, dead, 120 days	45.1
DO45091	56 years, male, NA, stage:2, dead, 1320 days	44.9
DO45203	71 years, female, NA, stage:2, alive, 1170 days	44.7
DO45111	74 years, male, NA, stage:2, alive, 1590 days	44.5
DO45273	62 years, male, NA, stage:2, alive, 480 days	44.5
DO45257	46 years, male, NA, stage:3, alive, 810 days	44.5
DO23521	63 years, male, NA, stage:3, alive, 1110 days	44.4
DO50859	77 years, male, NA, stage:2, alive, 180 days	43.8
DO23527	72 years, male, NA, stage:1, alive, 1050 days	43.8
DO45103	47 years, male, NA, stage:3, alive, 450 days	43.7
DO50819	72 years, female, NA, stage:2, alive, 510 days	43.0
DO50774	68 years, female, NA, stage:2, alive, 720 days	43.0
DO45253	50 years, male, NA, stage:2, alive, 870 days	42.9
DO45115	81 years, male, NA, stage:2, alive, 840 days	42.8
DO50855	47 years, male, NA, stage:2, alive, 570 days	42.8
DO45117	73 years, female, NA, stage:2, dead, 1110 days	42.4
DO23513	76 years, male, NA, stage:3, alive, 1200 days	42.0
DO45229	74 years, male, NA, stage:1, alive, 990 days	41.8
DO23526	66 years, male, NA, stage:3, alive, 1050 days	41.7
DO45121	61 years, male, NA, stage:3, alive, 1530 days	41.3
DO48697	64 years, female, NA, stage:2, dead, 810 days	41.2
DO50800	74 years, male, NA, stage:2, alive, 510 days	41.0
DO23546	63 years, male, NA, stage:2, alive, 1050 days	40.9
DO50803	62 years, female, NA, stage:1, alive, 540 days	40.4
DO23541	65 years, male, NA, stage:2, alive, 930 days	40.4
DO45261	74 years, male, NA, stage:3, alive, 990 days	40.2
DO48721	58 years, female, NA, stage:1, alive, 900 days	40.0
DO45105	61 years, male, NA, stage:1, alive, 1680 days	40.0
DO45099	46 years, male, NA, stage:3, alive, 1590 days	39.8
DO45173	63 years, male, NA, stage:3, alive, 1170 days	39.8
DO45165	75 years, male, NA, stage:2, alive, 690 days	39.7
DO48751	68 years, male, NA, stage:2, dead, 480 days	39.7
DO45305	66 years, male, NA, stage:4, alive, 300 days	39.0
DO45171	56 years, male, NA, stage:3, alive, 600 days	39.0
DO45143	69 years, male, NA, stage:3, alive, 1290 days	38.9
DO48730	73 years, female, NA, stage:2, alive, 630 days	38.8
DO50806	70 years, male, NA, stage:4, alive, 540 days	38.4
DO45113	58 years, male, NA, stage:3, alive, 1560 days	38.2
DO48742	76 years, male, NA, stage:2, alive, 600 days	38.1
DO50813	56 years, male, NA, stage:2, alive, 420 days	37.7
DO45221	75 years, female, NA, stage:4, dead, 390 days	37.6
DO50798	77 years, male, NA, stage:3, dead, 30 days	37.6
DO45177	81 years, female, NA, stage:3, alive, 1260 days	37.5
DO45285	59 years, male, NA, stage:3, alive, 480 days	37.2
DO50807	67 years, male, NA, stage:1, alive, 540 days	37.1
DO50808	68 years, male, NA, stage:2, alive, 570 days	37.1
DO23550	69 years, male, NA, stage:1, alive, 990 days	37.0
DO45243	74 years, female, NA, stage:3, alive, 930 days	37.0
DO45133	64 years, male, NA, stage:3, dead, 660 days	36.9
DO48700	78 years, female, NA, stage:2, alive, 810 days	36.8
DO45123	78 years, female, NA, stage:2, dead, 570 days	36.4
DO45307	54 years, female, NA, stage:4, dead, 240 days	36.4
DO23543	63 years, male, NA, stage:2, alive, 1020 days	36.3
DO45289	78 years, female, NA, stage:3, alive, 360 days	36.2
DO45181	84 years, female, NA, stage:2, alive, 1200 days	36.0
DO48677	58 years, male, NA, stage:3, alive, 1140 days	35.9
DO50787	63 years, male, NA, stage:3, alive, 480 days	35.9
DO48743	69 years, female, NA, stage:2, alive, 570 days	35.8
DO45161	74 years, male, NA, stage:2, dead, 540 days	35.7
DO48712	50 years, male, NA, stage:2, alive, 810 days	35.7
DO48746	76 years, male, NA, stage:3, alive, 570 days	35.7
DO23529	72 years, male, NA, stage:4, alive, 930 days	35.7
DO23515	71 years, male, NA, stage:2, alive, 1230 days	35.7
DO45167	67 years, male, NA, stage:2, dead, 1440 days	35.3
DO23512	60 years, male, NA, stage:1, alive, 1260 days	35.2
DO45129	61 years, male, NA, stage:3, alive, 1470 days	35.2
DO45096	69 years, male, NA, stage:2, dead, 1290 days	35.1
DO45281	83 years, male, NA, stage:4, alive, 750 days	35.0
DO45233	83 years, male, NA, stage:3, alive, 900 days	35.0
DO48761	55 years, male, NA, stage:2, alive, 870 days	35.0
DO50791	79 years, female, NA, stage:1, dead, 480 days	34.9
DO45267	73 years, male, NA, stage:3, dead, 570 days	34.6
DO45255	81 years, male, NA, stage:3, alive, 720 days	34.4
DO50857	72 years, male, NA, stage:2, alive, 210 days	34.4
DO50844	75 years, male, NA, stage:4, alive, 300 days	34.0
DO23548	78 years, female, NA, stage:1, alive, 840 days	34.0
DO45201	49 years, male, NA, stage:1, alive, 900 days	33.8
DO45153	77 years, female, NA, stage:2, alive, 1380 days	33.7
DO45235	68 years, female, NA, stage:1, alive, 900 days	33.6
DO48719	80 years, male, NA, stage:2, alive, 690 days	33.5
DO23538	67 years, male, NA, stage:2, alive, 450 days	33.3
DO48716	71 years, male, NA, stage:2, alive, 720 days	33.1
DO50825	70 years, male, NA, stage:2, alive, 390 days	32.9
DO45145	78 years, male, NA, stage:3, dead, 60 days	32.8
DO48725	66 years, male, NA, stage:1, alive, 780 days	32.7
DO45265	73 years, male, NA, stage:3, alive, 1020 days	32.4
DO227643	79 years, male, NA, stage:2, alive, 1260 days	32.4
DO48736	76 years, female, NA, stage:1, alive, 600 days	32.3
DO50840	49 years, male, NA, stage:2, alive, 330 days	32.0
DO23534	60 years, male, NA, stage:2, alive, 840 days	31.9
DO48733	72 years, male, NA, stage:2, alive, 600 days	31.8
DO45195	62 years, male, NA, stage:1, alive, 390 days	31.8
DO45215	65 years, male, NA, stage:2, alive, 1170 days	31.5
DO23551	73 years, male, NA, stage:3, dead, 150 days	31.3
DO45101	63 years, male, NA, stage:2, alive, 1680 days	31.3
DO23549	74 years, male, NA, stage:3, alive, 990 days	31.2
DO45094	76 years, male, NA, stage:3, alive, 1650 days	31.1
DO23528	45 years, female, NA, stage:2, alive, 1020 days	31.1
DO50818	65 years, male, NA, stage:2, alive, 510 days	30.9
DO45092	62 years, male, NA, stage:4, dead, 1200 days	30.8
DO50802	49 years, male, NA, stage:2, alive, 930 days	30.7
DO50822	66 years, male, NA, stage:2, alive, 510 days	30.6
DO23545	67 years, male, NA, stage:2, dead, 570 days	30.5
DO48701	78 years, male, NA, stage:2, alive, 780 days	30.4
DO48760	70 years, female, NA, stage:2, alive, 690 days	30.1
DO45217	69 years, female, NA, stage:3, dead, 270 days	30.0
DO48759	73 years, male, NA, stage:3, alive, 720 days	30.0
DO45149	70 years, female, NA, stage:2, alive, 1260 days	29.9
DO48747	62 years, male, NA, stage:3, alive, 540 days	29.5
DO23518	67 years, male, NA, stage:2, alive, 1320 days	29.4
DO50799	66 years, female, NA, stage:2, alive, 540 days	29.4
DO45093	71 years, male, NA, stage:2, dead, 720 days	29.4
DO48695	77 years, male, NA, stage:2, alive, 720 days	29.3
DO48681	57 years, male, NA, stage:2, alive, 900 days	28.3
DO45095	66 years, male, NA, stage:2, alive, 1620 days	28.2
DO50776	75 years, male, NA, stage:1, alive, 690 days	28.1
DO48679	72 years, male, NA, stage:2, alive, 1200 days	28.0
DO45175	74 years, male, NA, stage:2, alive, 1140 days	27.8
DO45199	86 years, female, NA, stage:2, alive, 1350 days	27.8
DO45269	59 years, male, NA, stage:3, alive, 750 days	27.8
DO45209	70 years, male, NA, stage:4, alive, 1350 days	27.6
DO50785	37 years, male, NA, stage:4, dead, 90 days	27.5
DO48757	68 years, female, NA, stage:3, alive, 480 days	27.3
DO23525	71 years, male, NA, stage:4, alive, 1050 days	26.7
DO45107	63 years, female, NA, stage:2, alive, 1710 days	26.6
DO50793	76 years, male, NA, stage:4, alive, 540 days	26.5
DO45241	49 years, male, NA, stage:1, alive, 1080 days	26.3
DO50845	72 years, male, NA, stage:3, alive, 210 days	26.2
DO23539	77 years, male, NA, stage:1, alive, 1110 days	26.1
DO23517	62 years, male, NA, stage:2, alive, 1200 days	25.0
DO48682	72 years, female, NA, stage:3, dead, 120 days	24.9
DO50805	72 years, male, NA, stage:2, alive, 690 days	24.9
DO48723	73 years, male, NA, stage:1, alive, 600 days	24.9
DO48706	72 years, male, NA, stage:2, alive, 870 days	24.9
DO48715	58 years, female, NA, stage:2, dead, 690 days	24.3
DO50783	62 years, male, NA, stage:3, alive, 480 days	23.7
DO45237	58 years, male, NA, stage:2, alive, 900 days	23.6
DO48717	54 years, male, NA, stage:4, dead, 180 days	23.3
DO23516	69 years, male, NA, stage:3, dead, 20 days	23.3
DO50811	62 years, male, NA, stage:1, alive, 450 days	23.1
DO50817	75 years, male, NA, stage:2, alive, 390 days	22.8
DO45245	75 years, female, NA, stage:2, dead, 240 days	22.8
DO23540	73 years, male, NA, stage:1, alive, 750 days	22.6
DO48737	52 years, male, NA, stage:1, alive, 720 days	22.4
DO50816	63 years, male, NA, stage:2, alive, 390 days	20.9
DO48693	71 years, male, NA, stage:2, alive, 900 days	20.9
DO50804	81 years, male, NA, stage:2, alive, 720 days	20.8
DO23511	83 years, female, NA, stage:3, dead, 180 days	20.2
DO45109	63 years, male, NA, stage:2, alive, 1590 days	20.0
DO23519	65 years, male, NA, stage:3, alive, 630 days	18.3
DO50815	62 years, male, NA, stage:3, alive, 150 days	18.0
DO23532	71 years, female, NA, stage:1, alive, 960 days	17.6
DO48741	64 years, male, NA, stage:3, alive, 240 days	16.8
DO48674	80 years, male, NA, stage:2, alive, 1260 days	16.8
DO23544	67 years, male, NA, stage:2, alive, 960 days	16.7
DO45125	58 years, male, NA, stage:3, alive, 1680 days	16.2
DO23508	79 years, female, NA, stage:2, alive, 390 days	15.5
DO50814	83 years, male, NA, stage:3, alive, 420 days	14.4
DO50839	47 years, female, NA, stage:3, alive, 330 days	12.2
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
471	Tumor	2.5
715	Tumor	1.8
413	Tumor	1.5
451	Tumor	1.4
1025	Tumor	1.2
385	Tumor	1.2
493	Tumor	1.2
227	Tumor	1.2
713	Tumor	1.2
697	Tumor	1.1
425	Tumor	1.1
363	Tumor	1.0
743	Tumor	1.0
573	Tumor	1.0
823	Tumor	0.8
192	Non-tumor	0.8
483	Tumor	0.8
983	Tumor	0.8
223	Tumor	0.7
221	Tumor	0.7
545	Tumor	0.7
517	Tumor	0.6
975	Tumor	0.6
467	Tumor	0.5
1043	Tumor	0.5
937	Tumor	0.5
863	Tumor	0.5
817	Tumor	0.5
112	Tumor	0.5
214	Non-tumor	0.4
963	Tumor	0.4
343	Tumor	0.4
1041	Tumor	0.4
222	Non-tumor	0.4
331	Tumor	0.4
191	Tumor	0.4
395	Tumor	0.4
877	Tumor	0.4
415	Tumor	0.4
213	Tumor	0.3
917	Tumor	0.3
557	Tumor	0.3
492	Non-tumor	0.3
815	Tumor	0.3
196	Non-tumor	0.3
217	Tumor	0.3
218	Non-tumor	0.3
851	Tumor	0.3
1031	Tumor	0.3
745	Tumor	0.2
534	Non-tumor	0.2
641	Tumor	0.2
755	Tumor	0.2
525	Tumor	0.2
777	Tumor	0.2
921	Tumor	0.2
421	Tumor	0.1
311	Tumor	0.1
967	Tumor	0.1
571	Tumor	0.1
443	Tumor	0.1
491	Tumor	0.1
686	Non-tumor	0.1
813	Tumor	0.1
954	Non-tumor	0.1
721	Tumor	0.1
384	Non-tumor	0.1
393	Tumor	0.1
137	Tumor	0.1
966	Non-tumor	0.1
814	Non-tumor	0.1
131	Tumor	0.1
187	Tumor	0.1
195	Tumor	0.1
951	Tumor	0.0
746	Non-tumor	0.0
978	Non-tumor	0.0
211	Tumor	0.0
516	Non-tumor	0.0
186	Non-tumor	0.0
498	Non-tumor	0.0
536	Non-tumor	0.0
1042	Non-tumor	0.0
535	Tumor	0.0
447	Tumor	0.0
125	Tumor	0.0
943	Tumor	0.0
135	Tumor	0.0
478	Non-tumor	0.0
861	Tumor	0.0
925	Tumor	0.0
314	Non-tumor	0.0
524	Non-tumor	0.0
737	Tumor	0.0
965	Tumor	0.0
388	Non-tumor	0.0
1015	Tumor	0.0
515	Tumor	0.0
546	Non-tumor	0.0
462	Non-tumor	0.0
361	Tumor	-0.1
142	Non-tumor	-0.1
857	Tumor	-0.1
816	Non-tumor	-0.1
162	Non-tumor	-0.1
284	Non-tumor	-0.1
716	Non-tumor	-0.1
563	Tumor	-0.1
297	Tumor	-0.1
574	Non-tumor	-0.1
283	Tumor	-0.1
538	Non-tumor	-0.1
852	Non-tumor	-0.1
278	Non-tumor	-0.1
224	Non-tumor	-0.1
968	Non-tumor	-0.1
435	Tumor	-0.1
484	Non-tumor	-0.1
914	Non-tumor	-0.1
472	Non-tumor	-0.1
938	Non-tumor	-0.1
862	Non-tumor	-0.1
494	Non-tumor	-0.1
271	Tumor	-0.1
185	Tumor	-0.1
353	Tumor	-0.1
172	Non-tumor	-0.1
916	Non-tumor	-0.1
488	Non-tumor	-0.1
864	Non-tumor	-0.1
955	Tumor	-0.1
1022	Non-tumor	-0.1
824	Non-tumor	-0.1
394	Non-tumor	-0.1
497	Tumor	-0.1
952	Non-tumor	-0.1
474	Non-tumor	-0.1
568	Non-tumor	-0.2
392	Non-tumor	-0.2
564	Non-tumor	-0.2
362	Non-tumor	-0.2
984	Non-tumor	-0.2
366	Non-tumor	-0.2
1026	Non-tumor	-0.2
433	Tumor	-0.2
671	Tumor	-0.2
148	Non-tumor	-0.2
868	Non-tumor	-0.2
685	Tumor	-0.2
742	Non-tumor	-0.2
526	Non-tumor	-0.2
123	Tumor	-0.2
351	Tumor	-0.2
514	Non-tumor	-0.2
452	Non-tumor	-0.2
1027	Tumor	-0.2
958	Non-tumor	-0.2
461	Tumor	-0.2
481	Tumor	-0.2
572	Non-tumor	-0.2
723	Tumor	-0.2
387	Tumor	-0.2
261	Tumor	-0.2
867	Tumor	-0.2
866	Non-tumor	-0.2
661	Tumor	-0.2
355	Tumor	-0.2
786	Non-tumor	-0.2
1032	Non-tumor	-0.2
212	Non-tumor	-0.2
444	Non-tumor	-0.2
873	Tumor	-0.2
724	Non-tumor	-0.2
147	Tumor	-0.2
126	Non-tumor	-0.2
412	Non-tumor	-0.2
944	Non-tumor	-0.2
446	Non-tumor	-0.2
145	Tumor	-0.2
558	Non-tumor	-0.2
1044	Non-tumor	-0.2
858	Non-tumor	-0.2
161	Tumor	-0.2
617	Tumor	-0.2
878	Non-tumor	-0.2
477	Tumor	-0.2
386	Non-tumor	-0.2
396	Non-tumor	-0.2
356	Non-tumor	-0.2
926	Non-tumor	-0.2
818	Non-tumor	-0.2
523	Tumor	-0.3
448	Non-tumor	-0.3
778	Non-tumor	-0.3
1046	Non-tumor	-0.3
1014	Non-tumor	-0.3
365	Tumor	-0.3
132	Non-tumor	-0.3
913	Tumor	-0.3
976	Non-tumor	-0.3
696	Non-tumor	-0.3
977	Tumor	-0.3
285	Tumor	-0.3
722	Non-tumor	-0.3
874	Non-tumor	-0.3
738	Non-tumor	-0.3
432	Non-tumor	-0.3
912	Non-tumor	-0.3
171	Tumor	-0.3
728	Non-tumor	-0.3
257	Tumor	-0.3
911	Tumor	-0.3
482	Non-tumor	-0.3
881	Tumor	-0.3
518	Non-tumor	-0.3
364	Non-tumor	-0.3
267	Tumor	-0.3
352	Non-tumor	-0.3
231	Tumor	-0.3
554	Non-tumor	-0.3
756	Non-tumor	-0.3
698	Non-tumor	-0.3
714	Non-tumor	-0.3
124	Non-tumor	-0.3
744	Non-tumor	-0.3
328	Non-tumor	-0.3
741	Tumor	-0.3
915	Tumor	-0.3
468	Non-tumor	-0.3
368	Non-tumor	-0.3
455	Tumor	-0.3
466	Non-tumor	-0.3
428	Non-tumor	-0.3
1021	Tumor	-0.3
883	Tumor	-0.3
956	Non-tumor	-0.3
513	Tumor	-0.3
456	Non-tumor	-0.3
258	Non-tumor	-0.3
923	Tumor	-0.3
882	Non-tumor	-0.4
463	Tumor	-0.4
332	Non-tumor	-0.4
367	Tumor	-0.4
376	Non-tumor	-0.4
375	Tumor	-0.4
981	Tumor	-0.4
272	Non-tumor	-0.4
268	Non-tumor	-0.4
922	Non-tumor	-0.4
1028	Non-tumor	-0.4
957	Tumor	-0.4
785	Tumor	-0.4
434	Non-tumor	-0.4
964	Non-tumor	-0.4
1016	Non-tumor	-0.4
188	Non-tumor	-0.4
228	Non-tumor	-0.4
924	Non-tumor	-0.4
128	Non-tumor	-0.4
286	Non-tumor	-0.4
232	Non-tumor	-0.4
1045	Tumor	-0.4
138	Non-tumor	-0.4
464	Non-tumor	-0.4
383	Tumor	-0.4
918	Non-tumor	-0.4
982	Non-tumor	-0.4
327	Tumor	-0.4
136	Non-tumor	-0.5
953	Tumor	-0.5
354	Non-tumor	-0.5
424	Non-tumor	-0.5
426	Non-tumor	-0.5
141	Tumor	-0.5
436	Non-tumor	-0.5
465	Tumor	-0.5
422	Non-tumor	-0.5
647	Tumor	-0.5
487	Tumor	-0.5
262	Non-tumor	-0.5
146	Non-tumor	-0.5
416	Non-tumor	-0.5
312	Non-tumor	-0.5
391	Tumor	-0.5
411	Tumor	-0.5
695	Tumor	-0.5
111	Non-tumor	-0.5
533	Tumor	-0.6
616	Non-tumor	-0.6
567	Tumor	-0.6
727	Tumor	-0.6
344	Non-tumor	-0.6
445	Tumor	-0.6
277	Tumor	-0.6
662	Non-tumor	-0.6
114	Non-tumor	-0.6
414	Non-tumor	-0.6
884	Non-tumor	-0.6
672	Non-tumor	-0.6
635	Tumor	-0.6
527	Tumor	-0.7
423	Tumor	-0.7
473	Tumor	-0.7
642	Non-tumor	-0.7
553	Tumor	-0.7
615	Tumor	-0.7
636	Non-tumor	-0.7
358	Non-tumor	-0.7
427	Tumor	-0.7
341	Tumor	-0.7
537	Tumor	-0.7
665	Tumor	-0.7
113	Tumor	-0.7
298	Non-tumor	-0.7
127	Tumor	-0.7
618	Non-tumor	-0.7
628	Non-tumor	-0.8
865	Tumor	-0.8
627	Tumor	-0.8
663	Tumor	-0.8
666	Non-tumor	-0.8
648	Non-tumor	-0.8
664	Non-tumor	-0.8
342	Non-tumor	-0.9
313	Tumor	-0.9
1013	Tumor	-0.9
528	Non-tumor	-0.9
357	Tumor	-1.0
431	Tumor	-1.0
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LIVER CANCER - Cancer proteome, tumor vs adjacent non-tumor (ProteinTalks DB, HCC)

Number of samples

76 (38 tumor / adjacent non-tumor pairs)

Detected in

12/38 tumors, 2/38 non-tumors

Tumor vs non-tumor

Not tested

Samples

Patient ID	Tumor	Non-tumor
HCC_37	11.8	8.8
HCC_19	10.2	N/A
HCC_21	10.0	N/A
HCC_15	9.9	N/A
HCC_29	9.6	N/A
HCC_38	9.5	8.9
HCC_23	9.4	N/A
HCC_36	9.2	N/A
HCC_28	8.8	N/A
HCC_34	8.8	N/A
HCC_33	8.6	N/A
HCC_30	8.4	N/A
HCC_01	N/A	N/A
HCC_02	N/A	N/A
HCC_03	N/A	N/A
HCC_04	N/A	N/A
HCC_05	N/A	N/A
HCC_06	N/A	N/A
HCC_07	N/A	N/A
HCC_08	N/A	N/A
HCC_09	N/A	N/A
HCC_10	N/A	N/A
HCC_11	N/A	N/A
HCC_12	N/A	N/A
HCC_13	N/A	N/A
HCC_14	N/A	N/A
HCC_16	N/A	N/A
HCC_17	N/A	N/A
HCC_18	N/A	N/A
HCC_20	N/A	N/A
HCC_22	N/A	N/A
HCC_24	N/A	N/A
HCC_25	N/A	N/A
HCC_26	N/A	N/A
HCC_27	N/A	N/A
HCC_31	N/A	N/A
HCC_32	N/A	N/A
HCC_35	N/A	N/A
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LIVER CANCER - Protein stainingⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample. Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes. Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based) Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts	Antibody HPA064784
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma