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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
128.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 128.3
Samples: 105
Max nTPM: 378.9
Min nTPM: 5.6
Std nTPM: 89.9
Median nTPM:
319_1
81 years, male
378.9
352_1
62 years, male
366.3
321_1
62 years, female
329.5
356_1
87 years, female
303.1
377_1
82 years, female
294.9
163_1
78 years, male
291.5
386_1
76 years, male
284.9
320_1
89 years, female
283.1
351_1
91 years, male
278.6
286_1
68 years, female
274.7
353_1
82 years, female
273.5
354_1
81 years, female
268.0
293_1
68 years, female
264.3
172_1
72 years, female
249.5
350_1
84 years, female
247.9
376_1
75 years, female
244.9
355_1
70 years, female
243.6
452_1
88 years, female
239.7
394_1
75 years, female
219.7
218_1
71 years, female
218.9
506_1
65 years, male
214.1
349_1
83 years, male
213.8
295_1
61 years, female
209.1
322_1
76 years, male
208.5
335_1
73 years, female
207.9
406_1
79 years, male
180.8
425_1
59 years, female
180.8
316_1
62 years, male
179.7
503_1
68 years, male
173.6
6_1
73 years, female
173.4
2_1
77 years, female
171.5
177_1
74 years, male
161.2
189_1
76 years, male
160.3
318_1
68 years, male
159.4
480_1
63 years, male
152.1
405_1
91 years, male
149.0
379_1
60 years, male
148.9
292_1
71 years, male
141.8
243_1
75 years, male
139.6
264_1
73 years, female
138.7
99_1
64 years, male
133.3
173_1
67 years, male
133.2
517_1
88 years, male
131.8
17_1
71 years, male
129.9
237_1
82 years, male
126.4
375_1
74 years, female
122.6
384_1
83 years, male
120.6
348_1
84 years, male
116.8
447_1
81 years, male
116.7
389_1
86 years, female
109.9
153_1
70 years, female
109.8
4_1
88 years, female
108.9
526_1
61 years, male
108.7
229_1
69 years, female
106.3
291_1
76 years, male
105.0
115_1
83 years, male
101.6
35_1
74 years, female
99.6
251_1
78 years, male
98.0
317_1
60 years, male
97.8
396_1
62 years, male
95.8
9_1
66 years, female
87.7
518_1
75 years, female
86.6
137_1
83 years, male
83.2
404_1
82 years, female
78.1
499_1
55 years, female
77.2
18_1
88 years, male
75.5
254_1
77 years, female
74.2
468_1
89 years, male
70.4
246_1
77 years, male
69.1
109_1
81 years, female
67.7
120_1
70 years, female
66.7
217_1
76 years, male
64.0
313_1
79 years, female
62.3
145_1
84 years, male
62.1
315_1
62 years, female
61.0
266_1
85 years, male
60.6
288_1
66 years, female
58.1
324_1
76 years, male
55.2
314_1
67 years, male
55.0
347_1
72 years, male
53.5
311_1
78 years, male
50.2
42_1
85 years, male
48.1
265_1
87 years, male
48.0
41_1
94 years, female
46.5
81_1
67 years, male
46.1
142_1
61 years, female
46.1
415_1
77 years, female
44.8
126_1
63 years, male
41.9
307_1
66 years, female
38.1
466_1
57 years, female
37.3
117_1
61 years, male
36.9
162_1
79 years, female
35.8
32_1
67 years, male
34.1
119_1
70 years, female
31.2
139_1
64 years, female
30.5
43_1
64 years, female
28.0
308_1
70 years, female
27.7
501_1
88 years, male
25.1
414_1
84 years, female
24.5
495_1
57 years, female
22.5
413_1
59 years, female
16.8
89_1
63 years, male
15.5
149_1
88 years, male
14.7
490_1
67 years, female
10.6
491_1
89 years, female
5.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
