HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:33.1 nTPM
HPA Brain:50.1 nTPM
GTEx:33.1 nTPM
FANTOM5:84.2 Scaled Tags Per Million
Pig:111.5 nTPM
Mouse:136.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014060
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 50.1
Sample id Sample description nTPM
Hippocampus
nTPM: 46.2
1898 Male, age 80, left hemisphere 57.5
1855 Male, age 76, left hemisphere 49.9
2621 Female, age 67, right hemisphere 44.8
1911 Female, age 85, right hemisphere 43.3
2529 Female, age 94, left hemisphere 42.0
2148 Female, age 91, left hemisphere 39.7
Dentate gyrus
nTPM: 46.8
2010 Male, age 76, both hemispheres 53.2
2530 Female, age 94, left hemisphere 50.4
2246 Female, age 85, both hemispheres 48.9
1927 Female, age 91, both hemispheres 47.4
2528 Male, age 74, both hemispheres 46.6
2531 Female, age 67, both hemispheres 34.4
Entorhinal gyrus
nTPM: 41.8
1938 Female, age 85, left hemisphere 54.1
2117 Female, age 91, right hemisphere 46.7
1787 Male, age 76, left hemisphere 44.4
2764 Male, age 80, right hemisphere 39.8
2613 Female, age 94, left hemisphere 33.2
2686 Male, age 75, right hemisphere 32.5
Hippocampus, CA1
nTPM: 50.1
2749 Male, age 80, left hemisphere 65.5
1873 Female, age 85, both hemispheres 49.3
2527 Male, age 74, both hemispheres 48.2
2045 Male, age 76, both hemispheres 45.4
2082 Female, age 91, right hemisphere 41.9
Hippocampus, CA2
nTPM: 49.9
2249 Male, age 74, both hemispheres 58.7
1963 Male, age 80, left hemisphere 53.6
1940 Female, age 85, left hemisphere 51.7
1892 Male, age 76, both hemispheres 50.7
2113 Female, age 91, right hemisphere 43.5
2437 Female, age 94, left hemisphere 41.5
Hippocampus, CA3
nTPM: 47.5
2436 Male, age 74, both hemispheres 57.9
2137 Male, age 80, left hemisphere 54.0
1867 Male, age 76, both hemispheres 53.2
1891 Female, age 85, both hemispheres 47.2
2620 Female, age 94, left hemisphere 38.6
2861 Female, age 67, both hemispheres 34.0
Parahippocampal cortex
nTPM: 45.5
2250 Female, age 67, right hemisphere 52.4
1933 Female, age 85, both hemispheres 52.0
1850 Male, age 80, both hemispheres 50.2
1990 Female, age 91, right hemisphere 48.0
2018 Male, age 76, both hemispheres 47.9
2532 Female, age 72, left hemisphere 45.0
2245 Female, age 91, both hemispheres 44.4
2693 Female, age 94, both hemispheres 44.3
2692 Male, age 74, both hemispheres 40.6
2622 Female, age 67, right hemisphere 30.2
Perirhinal gyrus
nTPM: 49.7
1841 Female, age 85, right hemisphere 55.0
2521 Female, age 94, right hemisphere 52.4
1847 Female, age 91, left hemisphere 50.0
2848 Male, age 76, right hemisphere 46.1
1794 Male, age 80, right hemisphere 44.9
Subiculum
nTPM: 47.5
1977 Female, age 85, both hemispheres 52.1
2438 Female, age 94, left hemisphere 50.9
2042 Male, age 76, both hemispheres 49.4
1901 Male, age 80, both hemispheres 49.1
2729 Female, age 91, right hemisphere 42.6
2619 Male, age 74, both hemispheres 40.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 33.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.1
Samples: 255

Max nTPM: 78.5
Min nTPM: 19.4
Std nTPM: 6.8
Median nTPM: 32.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 78.5
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 55.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 53.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 52.4
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 49.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 48.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 47.5
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 46.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 46.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 45.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 84.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.2
FF:10169-103B7 60 years, female 96.5
FF:10153-102I9 76 years, female 71.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 111.5
Pig sample Sample description nTPM
Subiculum
nTPM: 101.9
Samples: 4

Max nTPM: 119.4
Min nTPM: 92.1
Sample A Female 119.4
Sample B Female 99.2
Sample C Male 92.1
Sample D Male 96.9
Dorsal hippocampus
nTPM: 111.5
Samples: 4

Max nTPM: 138.4
Min nTPM: 82.9
Sample A Female 138.4
Sample B Female 110.6
Sample C Male 113.9
Sample D Male 82.9
Entorhinal cortex
nTPM: 91.1
Samples: 4

Max nTPM: 102.5
Min nTPM: 72.3
Sample A Female 93.8
Sample B Female 102.5
Sample C Male 95.8
Sample D Male 72.3
Ventral hippocampus
nTPM: 100.4
Samples: 4

Max nTPM: 109.7
Min nTPM: 82.9
Sample A Female 109.7
Sample B Female 82.9
Sample C Male 103.1
Sample D Male 105.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 136.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.4
Samples: 4

Max nTPM: 134.7
Min nTPM: 127.7
Sample A Male 127.7
Sample B Male 131.8
Sample C Female 134.7
Sample D Female 131.5
Hippocampal formation
nTPM: 136.3
Samples: 4

Max nTPM: 143.8
Min nTPM: 127.2
Sample A Male 142.5
Sample B Male 127.2
Sample C Female 143.8
Sample D Female 131.6

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