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BETA
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  • BRAIN

  • SINGLE CELL

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EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:69.8 nTPM
HPA Brain:39.7 nTPM
GTEx:69.8 nTPM
FANTOM5:24.6 Scaled Tags Per Million
Macaque:26.0 nTPM
Mouse:41.8 nTPM
Rat:6.6 nTPM
Pig:0.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 4838
Sample Intensity
Spinal cord_01
8292
Spinal cord_02
3231
Spinal cord_03
6723
Spinal cord_04
5607
Spinal cord_05
4070
Spinal cord_06
5006
Spinal cord_07
4669
Spinal cord_08
2469

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.7
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 36.8
2818 Female, age 79, both hemispheres 40.3
2193 Male, age 75, both hemispheres 36.8
2734 Male, age 80, both hemispheres 35.2
2819 Male, age 47, both hemispheres 34.8
Cervical spinal cord, central gray
nTPM: 30.9
1981 Female, age 72, midline 33.4
2048 Male, age 55, midline 33.0
2816 Male, age 47, midline 32.5
2194 Female, age 79, both hemispheres 30.9
2565 Male, age 75, midline 25.0
Cervical spinal cord, dorsal horn
nTPM: 31.1
2173 Female, age 72, unknown 37.3
2296 Male, age 66, both hemispheres 34.4
1877 Male, age 55, unknown 31.1
2297 Male, age 75, both hemispheres 29.9
2069 Male, age 47, both hemispheres 28.5
2721 Male, age 90, both hemispheres 25.3
Cervical spinal cord, ventral horn
nTPM: 33.0
2068 Male, age 55, unknown 36.0
2820 Female, age 79, both hemispheres 35.4
2098 Female, age 72, unknown 34.6
2295 Male, age 66, both hemispheres 34.6
2809 Male, age 90, both hemispheres 32.4
2480 Male, age 75, both hemispheres 24.9
Dorsal funiculus (white matter)
nTPM: 39.7
2810 Male, age 90, both hemispheres 45.4
2817 Male, age 47, both hemispheres 42.7
2128 Male, age 75, both hemispheres 37.6
2064 Female, age 79, both hemispheres 37.3
2812 Male, age 66, both hemispheres 35.5
Lateral funiculus (white matter)
nTPM: 37.1
2099 Male, age 90, both hemispheres 39.5
2094 Female, age 79, both hemispheres 38.2
2192 Male, age 75, both hemispheres 35.5
2294 Male, age 66, both hemispheres 34.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 69.8
Samples: 204

Max nTPM: 141.2
Min nTPM: 26.2
Std nTPM: 21.5
Median nTPM: 68.8
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 141.2
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 125.2
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 125.1
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 124.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 119.5
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 119.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 116.8
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 110.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 107.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 104.0
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 102.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 101.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 100.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 100.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 98.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 98.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 98.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 98.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 98.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 97.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 96.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 95.4
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 94.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 93.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 93.2
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 92.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 92.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 92.3
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 92.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 91.6
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 91.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 90.7
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 90.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 89.9
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 89.9
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 88.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 88.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 88.1
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 88.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 87.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 87.7
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 86.6
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 86.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 86.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 86.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 85.9
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 85.8
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 85.4
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 85.3
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 85.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 84.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 84.3
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 83.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 83.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 82.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 82.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 82.4
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 82.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 82.2
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 82.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 81.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 81.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 81.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 80.5
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 80.3
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 80.1
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 80.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 79.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 78.8
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 78.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 78.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 78.2
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 77.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 77.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 76.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 76.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 76.1
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 76.0
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 75.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 75.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 75.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 74.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 74.4
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 74.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 73.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 73.7
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 73.5
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 73.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 73.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 73.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 72.8
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 72.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 71.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 71.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 71.2
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 70.7
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 70.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 70.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 70.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 69.4
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 69.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 69.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 68.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 68.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 68.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 68.0
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 67.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 67.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 67.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 66.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 66.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 66.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 66.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 65.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 65.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 65.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 65.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 65.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 65.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 64.9
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 64.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 64.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 64.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 64.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 63.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 63.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 63.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 63.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 62.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 62.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 61.9
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 61.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 61.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 61.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 61.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 60.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 60.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 60.7
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 60.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 60.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 59.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 59.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 59.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 58.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 58.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 58.3
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 58.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 58.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 58.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 57.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 56.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 56.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 56.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 55.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 54.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 54.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 53.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 53.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 53.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 53.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 53.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 53.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 52.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 52.0
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 52.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 51.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 51.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 51.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 49.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 48.9
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 48.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 47.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 47.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 47.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 47.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 46.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 45.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 45.4
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 44.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 43.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 41.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 40.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 40.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 40.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 40.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 40.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 40.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 39.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 37.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 37.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 37.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 35.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 35.4
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 35.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 32.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 31.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 30.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 29.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 28.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 28.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 27.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 26.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 26.5
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 26.2
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

24.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 24.6
FF:10181-103D1 60 years, female 25.7
FF:10159-103A6 76 years, female 23.5

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.0
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 23.5
Samples: 2

Max nTPM: 23.7
Min nTPM: 23.3
Sample A 23.3
Sample B 23.7
Ventral spinal cord
nTPM: 26.0
Samples: 1

Max nTPM: 26.0
Min nTPM: 26.0
Sample A 26.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral spinal cord
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.8
Mouse sample Sample description nTPM
Spinal cord
nTPM: 41.8
Samples: 4

Max nTPM: 42.9
Min nTPM: 40.8
Sample A 42.0
Sample B 41.3
Sample C 40.8
Sample D 42.9

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.6
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 6.6
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.2
Sample A 5.2
Sample A 7.4
Sample A 6.9
Sample A 6.9

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