HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:242.9 nTPM
HPA Brain:216.1 nTPM
GTEx:242.9 nTPM
FANTOM5:113.5 Scaled Tags Per Million
Pig:308.0 nTPM
Mouse:458.4 nTPM
Allen mouse:26.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010811Antibody HPA010859
Glial cells MediumLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 216.1
Sample id Sample description nTPM
Hippocampus
nTPM: 179.0
1898 Male, age 80, left hemisphere 219.1
2621 Female, age 67, right hemisphere 197.2
1855 Male, age 76, left hemisphere 193.9
2148 Female, age 91, left hemisphere 163.6
1911 Female, age 85, right hemisphere 150.2
2529 Female, age 94, left hemisphere 150.0
Dentate gyrus
nTPM: 179.6
1927 Female, age 91, both hemispheres 219.0
2010 Male, age 76, both hemispheres 192.4
2530 Female, age 94, left hemisphere 182.6
2246 Female, age 85, both hemispheres 174.2
2528 Male, age 74, both hemispheres 155.3
2531 Female, age 67, both hemispheres 154.2
Entorhinal gyrus
nTPM: 178.1
2613 Female, age 94, left hemisphere 201.0
1938 Female, age 85, left hemisphere 198.3
2764 Male, age 80, right hemisphere 195.7
1787 Male, age 76, left hemisphere 181.4
2117 Female, age 91, right hemisphere 152.8
2686 Male, age 75, right hemisphere 139.0
Hippocampus, CA1
nTPM: 200.6
2749 Male, age 80, left hemisphere 310.4
2045 Male, age 76, both hemispheres 208.3
1873 Female, age 85, both hemispheres 183.0
2527 Male, age 74, both hemispheres 166.7
2082 Female, age 91, right hemisphere 134.4
Hippocampus, CA2
nTPM: 177.1
1892 Male, age 76, both hemispheres 222.5
1963 Male, age 80, left hemisphere 212.0
2249 Male, age 74, both hemispheres 170.9
2437 Female, age 94, left hemisphere 161.6
1940 Female, age 85, left hemisphere 157.4
2113 Female, age 91, right hemisphere 138.0
Hippocampus, CA3
nTPM: 203.2
2137 Male, age 80, left hemisphere 260.3
2620 Female, age 94, left hemisphere 240.0
1867 Male, age 76, both hemispheres 204.2
2436 Male, age 74, both hemispheres 199.4
2861 Female, age 67, both hemispheres 161.9
1891 Female, age 85, both hemispheres 153.2
Parahippocampal cortex
nTPM: 177.0
1850 Male, age 80, both hemispheres 205.6
2245 Female, age 91, both hemispheres 194.0
2250 Female, age 67, right hemisphere 193.6
2693 Female, age 94, both hemispheres 180.7
1933 Female, age 85, both hemispheres 180.1
2532 Female, age 72, left hemisphere 178.7
1990 Female, age 91, right hemisphere 178.5
2018 Male, age 76, both hemispheres 159.5
2622 Female, age 67, right hemisphere 153.0
2692 Male, age 74, both hemispheres 146.4
Perirhinal gyrus
nTPM: 216.1
1847 Female, age 91, left hemisphere 246.8
1794 Male, age 80, right hemisphere 240.8
1841 Female, age 85, right hemisphere 206.5
2848 Male, age 76, right hemisphere 193.8
2521 Female, age 94, right hemisphere 192.6
Subiculum
nTPM: 165.4
1901 Male, age 80, both hemispheres 188.6
1977 Female, age 85, both hemispheres 175.3
2042 Male, age 76, both hemispheres 167.8
2619 Male, age 74, both hemispheres 165.6
2438 Female, age 94, left hemisphere 163.0
2729 Female, age 91, right hemisphere 132.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 242.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 242.9
Samples: 255

Max nTPM: 437.5
Min nTPM: 102.9
Std nTPM: 66.1
Median nTPM: 237.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 437.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 425.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 419.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 401.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 401.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 400.2
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 399.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 380.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 373.1
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 373.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 370.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 113.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.5
FF:10169-103B7 60 years, female 120.4
FF:10153-102I9 76 years, female 106.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 308.0
Pig sample Sample description nTPM
Subiculum
nTPM: 248.1
Samples: 4

Max nTPM: 315.8
Min nTPM: 219.5
Sample A Female 315.8
Sample B Female 219.5
Sample C Male 234.7
Sample D Male 222.3
Dorsal hippocampus
nTPM: 308.1
Samples: 4

Max nTPM: 399.6
Min nTPM: 246.9
Sample A Female 399.6
Sample B Female 313.2
Sample C Male 272.5
Sample D Male 246.9
Entorhinal cortex
nTPM: 271.1
Samples: 4

Max nTPM: 308.6
Min nTPM: 242.9
Sample A Female 308.6
Sample B Female 264.4
Sample C Male 268.6
Sample D Male 242.9
Ventral hippocampus
nTPM: 285.6
Samples: 4

Max nTPM: 351.2
Min nTPM: 184.9
Sample A Female 282.6
Sample B Female 184.9
Sample C Male 323.7
Sample D Male 351.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 458.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 409.9
Samples: 4

Max nTPM: 425.6
Min nTPM: 395.1
Sample A Male 395.1
Sample B Male 425.6
Sample C Female 397.8
Sample D Female 420.9
Hippocampal formation
nTPM: 458.4
Samples: 4

Max nTPM: 484.7
Min nTPM: 445.0
Sample A Male 445.0
Sample B Male 451.3
Sample C Female 484.7
Sample D Female 452.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 26.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.8
513491 Antisense, RP_040810_01_H11, Mouse strain C57BL/6J (56 days, male) 26.8

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