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  • TISSUE

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  • MLF2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:208.4 nTPM
HPA Brain:188.9 nTPM
GTEx:208.4 nTPM
Pig:210.4 nTPM
Mouse:290.9 nTPM
Allen mouse:19.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 178.8
2226 Male, age 75, left hemisphere 207.6
1961 Female, age 42, unknown 149.9
Dorsomedial nucleus
nTPM: 148.6
1989 Male, age 62, unknown 171.1
2041 Female, age 72, unknown 149.9
2017 Female, age 42, unknown 124.9
Lateral hypothalamic area
nTPM: 188.9
1791 Male, age 80, right hemisphere 212.0
2271 Male, age 75, both hemispheres 198.4
2228 Male, age 66, unknown 194.8
2412 Male, age 62, unknown 150.3
Mammillary body
nTPM: 162.2
1923 Female, age 72, unknown 212.3
2413 Male, age 66, unknown 167.4
1948 Female, age 72, unknown 149.1
1834 Female, age 42, unknown 144.0
1945 Male, age 80, right hemisphere 138.5
Paraventricular nucleus
nTPM: 172.0
2700 Male, age 62, unknown 172.0
Preoptic area
nTPM: 152.2
1907 Male, age 80, right hemisphere 168.4
1861 Female, age 42, unknown 147.8
2414 Female, age 72, unknown 140.6
Supraoptic nucleus
nTPM: 163.4
2835 Female, age 72, unknown 185.5
1894 Female, age 72, unknown 156.8
2043 Male, age 62, unknown 147.9
Ventromedial nucleus
nTPM: 165.8
1982 Female, age 72, unknown 179.6
1822 Female, age 42, unknown 152.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 208.4
Samples: 257

Max nTPM: 372.0
Min nTPM: 123.2
Std nTPM: 37.6
Median nTPM: 208.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 372.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 334.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 313.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 299.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 299.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 296.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 292.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 290.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 287.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 286.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 284.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 276.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 276.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 275.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 271.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 265.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 263.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 262.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 261.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 261.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 260.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 260.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 259.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 254.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 254.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 253.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 252.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 251.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 250.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 248.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 248.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 247.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 246.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 246.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 246.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 243.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 243.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 243.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 239.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 238.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 238.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 238.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 238.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 238.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 237.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 237.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 237.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 236.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 236.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 235.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 235.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 235.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 234.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 234.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 233.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 233.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 232.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 231.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 231.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 231.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 231.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 231.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 230.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 229.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 229.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 229.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 229.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 229.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 228.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 228.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 227.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 227.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 227.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 226.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 225.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 225.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 224.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 224.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 223.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 223.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 223.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 223.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 223.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 222.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 222.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 222.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 222.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 221.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 221.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 220.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 220.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 220.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 220.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 219.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 219.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 219.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 218.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 217.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 217.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 217.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 217.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 216.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 216.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 216.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 216.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 215.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 215.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 215.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 214.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 214.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 214.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 213.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 213.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 212.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 212.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 212.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 212.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 211.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 211.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 211.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 210.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 209.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 209.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 209.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 208.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 208.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 208.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 208.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 208.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 207.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 207.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 207.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 206.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 206.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 205.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 205.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 205.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 205.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 204.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 204.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 204.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 203.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 203.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 203.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 203.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 203.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 202.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 202.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 202.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 201.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 201.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 201.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 200.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 200.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 200.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 199.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 199.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 198.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 198.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 197.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 197.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 196.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 195.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 194.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 194.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 193.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 193.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 193.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 192.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 192.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 192.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 192.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 191.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 191.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 190.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 188.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 188.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 188.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 188.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 186.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 186.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 186.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 186.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 185.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 185.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 184.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 183.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 183.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 183.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 183.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 183.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 183.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 182.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 181.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 181.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 180.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 180.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 180.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 179.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 178.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 178.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 178.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 178.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 176.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 175.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 175.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 175.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 175.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 174.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 174.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 174.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 173.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 173.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 173.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 172.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 171.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 171.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 171.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 170.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 169.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 169.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 169.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 168.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 166.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 166.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 165.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 164.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 164.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 164.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 163.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 162.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 161.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 161.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 160.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 159.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 159.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 155.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 154.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 153.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 153.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 152.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 151.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 151.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 151.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 150.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 149.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 147.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 145.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 144.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 144.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 143.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 142.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 140.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 134.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 125.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 123.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 123.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 210.4
Samples: 4

Max nTPM: 268.1
Min nTPM: 167.9
Sample A Female 268.1
Sample B Female 204.7
Sample C Male 200.9
Sample D Male 167.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

290.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 290.9
Samples: 4

Max nTPM: 328.3
Min nTPM: 262.3
Sample A Male 291.8
Sample B Male 328.3
Sample C Female 262.3
Sample D Female 281.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.1
513491 Antisense, RP_040810_01_H11, Mouse strain C57BL/6J (56 days, male) 19.1

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