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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • RGS1
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:415.3 nTPM
HPA Brain:73.1 nTPM
GTEx:415.3 nTPM
FANTOM5:727.0 Scaled Tags Per Million
Macaque:45.7 nTPM
Mouse:0.0 nTPM
Rat:0.3 nTPM
Pig:101.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity ND
Sample Intensity
Spinal cord_01
ND
Spinal cord_02
ND
Spinal cord_03
ND
Spinal cord_04
ND
Spinal cord_05
ND
Spinal cord_06
ND
Spinal cord_07
ND
Spinal cord_08
ND

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.1
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 41.5
2818 Female, age 79, both hemispheres 70.1
2193 Male, age 75, both hemispheres 50.8
2819 Male, age 47, both hemispheres 23.8
2734 Male, age 80, both hemispheres 21.3
Cervical spinal cord, central gray
nTPM: 25.6
1981 Female, age 72, midline 44.8
2194 Female, age 79, both hemispheres 25.7
2048 Male, age 55, midline 22.6
2816 Male, age 47, midline 18.3
2565 Male, age 75, midline 16.5
Cervical spinal cord, dorsal horn
nTPM: 30.2
2069 Male, age 47, both hemispheres 64.3
2173 Female, age 72, unknown 45.1
2721 Male, age 90, both hemispheres 21.9
2296 Male, age 66, both hemispheres 21.1
1877 Male, age 55, unknown 19.1
2297 Male, age 75, both hemispheres 9.7
Cervical spinal cord, ventral horn
nTPM: 37.7
2098 Female, age 72, unknown 149.2
2295 Male, age 66, both hemispheres 28.5
2809 Male, age 90, both hemispheres 19.0
2820 Female, age 79, both hemispheres 12.0
2480 Male, age 75, both hemispheres 8.7
2068 Male, age 55, unknown 8.6
Dorsal funiculus (white matter)
nTPM: 47.0
2128 Male, age 75, both hemispheres 74.5
2810 Male, age 90, both hemispheres 50.7
2064 Female, age 79, both hemispheres 40.8
2817 Male, age 47, both hemispheres 35.4
2812 Male, age 66, both hemispheres 33.4
Lateral funiculus (white matter)
nTPM: 73.1
2192 Male, age 75, both hemispheres 87.7
2294 Male, age 66, both hemispheres 83.1
2099 Male, age 90, both hemispheres 78.4
2094 Female, age 79, both hemispheres 43.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

415.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 415.3
Samples: 204

Max nTPM: 2143.4
Min nTPM: 8.4
Std nTPM: 362.5
Median nTPM: 322.5
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 2143.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1560.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1497.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1463.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1411.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1391.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1389.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1265.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1245.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1239.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1211.1
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 1117.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1111.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1093.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1080.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1041.8
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 994.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 981.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 970.5
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 966.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 911.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 882.9
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 844.7
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 840.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 826.0
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 806.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 794.0
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 750.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 745.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 740.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 727.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 726.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 724.7
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 716.8
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 689.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 687.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 680.6
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 675.7
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 668.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 661.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 659.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 648.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 648.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 648.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 625.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 622.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 586.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 586.7
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 586.0
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 585.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 580.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 578.1
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 566.0
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 559.9
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 553.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 549.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 536.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 536.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 524.8
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 514.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 510.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 503.4
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 500.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 494.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 492.1
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 487.1
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 475.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 473.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 471.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 458.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 458.4
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 451.4
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 447.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 447.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 442.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 442.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 439.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 438.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 435.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 434.0
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 434.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 416.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 409.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 405.3
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 405.0
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 393.2
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 386.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 382.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 367.1
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 363.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 360.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 359.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 351.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 348.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 346.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 342.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 335.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 335.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 331.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 330.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 325.7
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 322.7
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 322.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 318.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 316.6
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 311.1
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 311.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 302.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 297.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 296.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 290.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 290.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 276.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 273.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 273.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 266.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 260.2
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 258.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 258.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 257.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 247.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 244.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 241.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 236.8
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 236.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 229.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 228.6
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 212.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 212.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 206.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 204.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 204.3
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 202.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 198.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 197.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 193.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 193.0
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 186.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 184.2
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 176.7
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 170.8
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 169.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 168.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 166.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 166.3
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 162.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 160.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 156.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 155.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 154.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 153.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 151.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 147.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 143.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 137.7
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 135.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 134.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 134.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 133.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 132.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 128.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 120.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 114.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 113.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 109.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 108.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 104.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 101.9
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 98.7
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 96.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 94.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 93.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 91.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 85.1
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 84.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 84.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 80.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 75.7
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 74.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 71.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 71.1
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 70.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 68.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 66.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 60.8
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 60.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 59.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 56.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 52.9
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 50.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 45.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 41.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 41.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 36.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 34.6
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 33.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 30.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 30.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 26.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 18.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 15.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 11.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 10.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 8.4
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

727.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 727.0
FF:10181-103D1 60 years, female 843.5
FF:10159-103A6 76 years, female 610.4

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.7
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 38.0
Samples: 2

Max nTPM: 55.8
Min nTPM: 20.1
Sample A 55.8
Sample B 20.1
Ventral spinal cord
nTPM: 45.7
Samples: 1

Max nTPM: 45.7
Min nTPM: 45.7
Sample A 45.7

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 101.7
Samples: 4

Max nTPM: 163.0
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 154.5
Sample C Male 163.0
Sample D Male 73.5
Ventral spinal cord
nTPM: 56.4
Samples: 4

Max nTPM: 76.3
Min nTPM: 18.0
Sample A Female 18.0
Sample B Female 76.3
Sample C Male 65.4
Sample D Male 65.9

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Mouse sample Sample description nTPM
Spinal cord
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A 0.0
Sample B 0.0
Sample C 0.0
Sample D 0.0

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.3
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 0.3
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.1
Sample A 0.3
Sample A 0.2
Sample A 0.1
Sample A 0.6

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