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SLC22A17
HPA
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  • SUMMARY

  • TISSUE

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  • SLC22A17
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:276.8 nTPM
HPA Brain:731.7 nTPM
GTEx:276.8 nTPM
Pig:600.6 nTPM
Mouse:399.8 nTPM
Allen mouse:20.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

731.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 731.7
2226 Male, age 75, left hemisphere 871.7
1961 Female, age 42, unknown 591.6
Dorsomedial nucleus
nTPM: 431.9
2041 Female, age 72, unknown 487.4
2017 Female, age 42, unknown 436.4
1989 Male, age 62, unknown 371.9
Lateral hypothalamic area
nTPM: 565.7
2228 Male, age 66, unknown 789.2
1791 Male, age 80, right hemisphere 606.8
2271 Male, age 75, both hemispheres 476.1
2412 Male, age 62, unknown 390.7
Mammillary body
nTPM: 309.7
1923 Female, age 72, unknown 438.0
1945 Male, age 80, right hemisphere 319.5
1948 Female, age 72, unknown 273.7
2413 Male, age 66, unknown 272.3
1834 Female, age 42, unknown 245.0
Paraventricular nucleus
nTPM: 448.4
2700 Male, age 62, unknown 448.4
Preoptic area
nTPM: 462.2
1907 Male, age 80, right hemisphere 657.2
1861 Female, age 42, unknown 391.2
2414 Female, age 72, unknown 338.2
Supraoptic nucleus
nTPM: 405.6
2835 Female, age 72, unknown 433.0
1894 Female, age 72, unknown 430.0
2043 Male, age 62, unknown 353.6
Ventromedial nucleus
nTPM: 557.2
1982 Female, age 72, unknown 600.2
1822 Female, age 42, unknown 514.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

276.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 276.8
Samples: 257

Max nTPM: 627.2
Min nTPM: 8.3
Std nTPM: 147.9
Median nTPM: 260.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 627.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 573.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 573.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 572.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 571.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 567.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 566.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 565.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 557.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 551.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 539.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 536.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 534.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 522.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 522.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 522.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 515.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 512.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 507.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 495.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 487.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 483.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 476.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 474.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 473.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 471.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 470.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 469.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 468.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 466.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 466.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 464.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 461.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 461.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 461.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 459.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 458.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 452.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 451.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 451.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 450.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 450.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 450.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 450.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 441.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 440.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 440.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 439.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 438.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 425.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 425.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 422.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 419.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 417.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 417.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 415.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 414.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 413.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 412.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 411.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 406.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 406.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 405.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 404.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 404.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 403.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 400.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 399.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 394.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 391.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 389.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 386.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 383.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 382.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 381.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 380.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 380.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 377.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 372.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 371.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 368.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 365.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 364.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 359.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 359.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 357.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 357.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 356.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 355.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 348.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 334.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 332.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 330.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 328.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 328.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 327.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 327.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 321.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 317.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 314.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 313.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 313.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 312.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 308.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 304.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 300.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 298.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 298.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 297.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 293.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 291.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 290.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 290.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 289.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 289.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 284.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 282.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 280.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 279.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 278.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 274.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 274.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 271.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 266.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 262.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 262.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 261.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 261.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 260.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 260.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 260.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 254.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 253.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 253.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 249.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 247.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 243.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 241.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 238.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 237.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 237.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 237.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 236.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 235.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 234.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 232.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 231.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 228.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 227.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 226.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 225.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 224.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 223.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 220.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 219.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 218.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 216.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 215.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 211.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 210.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 209.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 209.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 203.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 203.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 199.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 199.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 193.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 192.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 192.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 187.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 186.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 186.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 186.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 184.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 183.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 181.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 181.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 181.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 180.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 178.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 178.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 177.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 176.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 171.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 171.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 169.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 168.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 163.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 162.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 162.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 158.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 157.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 157.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 155.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 155.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 153.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 153.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 151.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 150.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 144.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 143.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 142.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 136.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 132.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 131.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 129.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 124.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 123.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 122.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 122.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 122.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 120.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 117.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 116.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 114.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 114.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 113.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 112.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 111.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 107.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 102.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 101.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 100.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 100.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 100.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 100.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 90.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 90.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 89.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 88.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 87.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 85.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 84.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 82.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 81.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 81.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 78.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 76.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 74.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 73.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 71.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 70.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 66.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 64.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 58.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 55.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 54.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 53.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 53.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 41.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 35.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 33.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 32.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 27.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 19.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 11.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 8.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

600.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 600.6
Samples: 4

Max nTPM: 776.2
Min nTPM: 526.5
Sample A Female 776.2
Sample B Female 535.9
Sample C Male 563.6
Sample D Male 526.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

399.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 399.9
Samples: 4

Max nTPM: 462.5
Min nTPM: 346.2
Sample A Male 432.0
Sample B Male 462.5
Sample C Female 358.8
Sample D Female 346.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 20.1
74635072 Antisense, RP_060215_03_C09, Mouse strain C57BL/6J (56 days, male) 20.1

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