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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • EVOLUTION

  • HNRNPC
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN35 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT10 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM7 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE11 SKIN3 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE DURA MATER EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:249.1 nTPM
GTEx:256.5 nTPM
FANTOM5:26.6 Scaled Tags Per Million
Pig:290.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

249.1
Sample id Sample description nTPM
Putamen
nTPM: 249.1
2482 Female, age 94, left hemisphere 295.2
2466 Female, age 79, unknown 268.5
1838 Male, age 80, right hemisphere 260.5
1937 Female, age 91, right hemisphere 259.8
1829 Male, age 74, unknown 254.9
2647 Male, age 75, left hemisphere 203.2
2489 Female, age 72, unknown 201.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

256.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 256.5
Samples: 254

Max nTPM: 452.0
Min nTPM: 185.3
Std nTPM: 41.5
Median nTPM: 247.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 452.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 445.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 405.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 360.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 357.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 355.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 354.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 353.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 348.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 343.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 340.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 340.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 339.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 333.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 328.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 327.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 325.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 324.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 323.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 323.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 322.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 318.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 315.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 314.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 311.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 310.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 308.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 308.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 307.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 305.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 304.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 304.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 303.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 301.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 299.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 298.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 297.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 296.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 295.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 294.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 292.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 291.9
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 291.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 291.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 291.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 291.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 289.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 288.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 288.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 287.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 287.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 286.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 285.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 285.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 284.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 284.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 284.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 284.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 284.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 284.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 283.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 282.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 281.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 278.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 277.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 277.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 276.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 275.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 271.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 270.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 269.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 269.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 267.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 267.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 267.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 267.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 266.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 266.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 265.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 264.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 264.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 263.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 263.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 263.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 263.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 263.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 262.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 262.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 262.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 260.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 260.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 259.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 257.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 257.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 257.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 257.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 257.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 256.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 256.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 255.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 255.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 255.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 255.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 254.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 253.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 253.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 253.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 252.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 252.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 252.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 251.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 251.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 251.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 251.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 251.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 251.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 251.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 250.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 250.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 249.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 249.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 248.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 248.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 248.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 247.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 247.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 247.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 247.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 246.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 246.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 246.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 246.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 246.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 246.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 245.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 245.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 245.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 245.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 245.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 245.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 244.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 244.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 244.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 244.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 244.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 243.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 243.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 243.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 243.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 242.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 242.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 241.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 241.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 241.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 240.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 240.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 240.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 240.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 240.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 239.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 239.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 239.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 238.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 238.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 238.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 237.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 237.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 237.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 236.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 236.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 236.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 236.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 235.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 235.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 233.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 233.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 232.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 232.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 231.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 231.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 231.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 231.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 230.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 229.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 229.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 229.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 228.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 228.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 228.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 227.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 227.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 227.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 227.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 226.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 226.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 226.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 226.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 225.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 224.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 224.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 224.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 224.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 223.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 223.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 223.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 223.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 223.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 222.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 222.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 222.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 222.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 221.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 221.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 220.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 220.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 220.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 220.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 219.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 219.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 219.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 217.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 216.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 216.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 216.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 215.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 215.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 214.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 214.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 213.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 212.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 212.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 211.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 211.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 210.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 208.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 207.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 207.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 206.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 205.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 204.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 204.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 203.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 202.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 200.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 200.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 199.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 197.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 196.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 196.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 195.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 194.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 190.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 189.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 185.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 26.6
FF:10176-103C5 60 years, female 26.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

290.8
Pig sample Sample description nTPM
Putamen
nTPM: 290.8
Samples: 3

Max nTPM: 354.7
Min nTPM: 241.3
Sample B Female 241.3
Sample C Male 354.7
Sample D Male 276.4

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