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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • MYL6
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN41 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
HIPPOCAMPAL FORMATION HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTAL AREA SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:206.8 nTPM
GTEx:582.4 nTPM
FANTOM5:210.8 Scaled Tags Per Million
Pig:438.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

206.8
Sample id Sample description nTPM
Putamen
nTPM: 206.8
2482 Female, age 94, left hemisphere 276.8
2647 Male, age 75, left hemisphere 242.5
2489 Female, age 72, unknown 203.4
1937 Female, age 91, right hemisphere 199.9
1838 Male, age 80, right hemisphere 184.7
2466 Female, age 79, unknown 170.9
1829 Male, age 74, unknown 169.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

582.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 582.4
Samples: 254

Max nTPM: 1309.5
Min nTPM: 170.1
Std nTPM: 165.0
Median nTPM: 552.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1309.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1143.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1133.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1060.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1037.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1007.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1005.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 979.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 960.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 957.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 954.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 907.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 885.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 848.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 843.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 832.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 826.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 824.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 820.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 815.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 813.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 808.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 804.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 801.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 796.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 795.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 791.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 789.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 788.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 782.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 781.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 779.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 777.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 773.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 772.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 764.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 763.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 762.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 761.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 760.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 759.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 753.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 742.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 740.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 732.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 731.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 724.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 719.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 713.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 705.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 702.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 695.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 695.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 693.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 691.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 687.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 687.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 686.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 682.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 678.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 677.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 673.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 670.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 668.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 668.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 663.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 661.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 661.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 659.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 659.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 654.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 651.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 648.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 646.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 641.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 635.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 634.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 633.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 631.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 627.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 625.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 625.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 623.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 622.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 620.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 619.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 617.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 616.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 610.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 609.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 609.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 608.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 608.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 607.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 606.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 602.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 599.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 598.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 595.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 594.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 592.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 589.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 588.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 587.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 578.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 574.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 573.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 570.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 569.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 568.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 567.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 566.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 566.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 566.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 565.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 565.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 564.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 563.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 563.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 563.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 562.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 558.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 557.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 555.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 555.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 554.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 552.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 552.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 551.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 551.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 550.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 548.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 543.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 542.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 542.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 537.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 537.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 537.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 536.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 532.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 532.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 532.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 531.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 531.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 528.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 528.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 526.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 522.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 520.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 519.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 517.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 514.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 514.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 512.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 511.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 510.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 508.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 506.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 506.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 506.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 503.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 502.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 502.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 499.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 497.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 495.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 493.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 492.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 492.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 492.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 491.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 490.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 490.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 487.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 486.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 484.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 484.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 483.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 483.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 481.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 481.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 480.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 479.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 478.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 478.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 477.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 477.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 476.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 474.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 473.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 472.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 470.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 470.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 469.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 468.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 468.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 467.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 463.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 461.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 457.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 456.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 455.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 454.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 453.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 452.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 448.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 447.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 444.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 444.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 443.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 443.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 442.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 436.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 435.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 433.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 433.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 430.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 430.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 429.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 428.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 425.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 424.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 422.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 421.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 420.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 419.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 419.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 416.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 414.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 413.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 408.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 401.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 398.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 394.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 392.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 383.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 379.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 371.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 369.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 368.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 363.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 363.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 359.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 351.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 350.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 348.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 345.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 340.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 334.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 332.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 329.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 324.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 301.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 170.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

210.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 210.8
FF:10176-103C5 60 years, female 210.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

438.8
Pig sample Sample description nTPM
Putamen
nTPM: 438.8
Samples: 3

Max nTPM: 575.6
Min nTPM: 348.4
Sample B Female 348.4
Sample C Male 575.6
Sample D Male 392.4

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