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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

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  • CELL LINE

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  • NANS
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:22.2 nTPM
HPA Brain:28.2 nTPM
GTEx:22.2 nTPM
FANTOM5:21.4 Scaled Tags Per Million
Macaque:25.8 nTPM
Mouse:10.5 nTPM
Rat:29.5 nTPM
Pig:30.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 18789
Sample Intensity
Spinal cord_01
21653
Spinal cord_02
22273
Spinal cord_03
21564
Spinal cord_04
15388
Spinal cord_05
20209
Spinal cord_06
10289
Spinal cord_07
15767
Spinal cord_08
17368

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.2
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 25.5
2193 Male, age 75, both hemispheres 30.1
2819 Male, age 47, both hemispheres 28.6
2734 Male, age 80, both hemispheres 22.8
2818 Female, age 79, both hemispheres 20.5
Cervical spinal cord, central gray
nTPM: 21.8
1981 Female, age 72, midline 27.0
2194 Female, age 79, both hemispheres 25.0
2565 Male, age 75, midline 21.3
2816 Male, age 47, midline 18.8
2048 Male, age 55, midline 17.0
Cervical spinal cord, dorsal horn
nTPM: 23.5
2297 Male, age 75, both hemispheres 26.8
2069 Male, age 47, both hemispheres 26.6
2721 Male, age 90, both hemispheres 25.4
2173 Female, age 72, unknown 25.0
2296 Male, age 66, both hemispheres 19.2
1877 Male, age 55, unknown 18.4
Cervical spinal cord, ventral horn
nTPM: 23.1
2809 Male, age 90, both hemispheres 29.6
2098 Female, age 72, unknown 25.9
2295 Male, age 66, both hemispheres 22.0
2480 Male, age 75, both hemispheres 21.5
2068 Male, age 55, unknown 21.2
2820 Female, age 79, both hemispheres 18.3
Dorsal funiculus (white matter)
nTPM: 20.2
2128 Male, age 75, both hemispheres 27.6
2812 Male, age 66, both hemispheres 19.8
2064 Female, age 79, both hemispheres 18.5
2810 Male, age 90, both hemispheres 17.5
2817 Male, age 47, both hemispheres 17.5
Lateral funiculus (white matter)
nTPM: 28.2
2294 Male, age 66, both hemispheres 34.8
2192 Male, age 75, both hemispheres 33.6
2094 Female, age 79, both hemispheres 22.2
2099 Male, age 90, both hemispheres 22.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 22.2
Samples: 204

Max nTPM: 63.6
Min nTPM: 10.8
Std nTPM: 7.2
Median nTPM: 20.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 63.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 47.2
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 45.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 43.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 42.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 39.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 38.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 38.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 38.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 37.9
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 37.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 36.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 35.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 35.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 33.9
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 33.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 32.5
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 32.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 31.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 31.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 31.5
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 31.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 30.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 30.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 30.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 30.0
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 30.0
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 29.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 29.6
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 29.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 29.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 28.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 28.5
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 28.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 28.3
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 28.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 28.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 27.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 27.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 27.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 27.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 27.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 27.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 26.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 26.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 25.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 25.8
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 25.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 25.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 24.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 24.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 24.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 24.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 24.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 24.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 24.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 24.4
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 24.4
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 23.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 23.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 23.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 23.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 23.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 23.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 23.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 23.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 22.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 22.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 22.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 22.8
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 22.4
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 22.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 22.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 22.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 22.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 21.9
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 21.9
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 21.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 21.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 21.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 21.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 21.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 21.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 21.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 21.5
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 21.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 21.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 21.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 20.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 20.7
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 20.7
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 20.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 20.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 20.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 20.5
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 20.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 20.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 20.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 20.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 20.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 20.1
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 20.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 20.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 20.0
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 19.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 19.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 19.8
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 19.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 19.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 19.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 19.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 19.5
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 19.5
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 19.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 19.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 19.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 19.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 19.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 19.2
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 19.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 19.1
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 19.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 19.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 18.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 18.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 18.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 18.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 18.7
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 18.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 18.6
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 18.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 18.5
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 18.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 18.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 18.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 18.3
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 18.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 18.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 18.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 18.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 18.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 18.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 17.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 17.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 17.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 17.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 17.8
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 17.7
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 17.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 17.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 17.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 17.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 17.4
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 17.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 17.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 17.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 17.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 17.1
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 17.1
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 17.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 16.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 16.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 16.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 16.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 16.7
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 16.7
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 16.7
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 16.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 16.5
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 16.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 16.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 16.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 16.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 16.2
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 16.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 16.2
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 16.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 16.0
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 15.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 15.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 15.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 15.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 15.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 15.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 15.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 15.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 15.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 15.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 15.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 15.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 15.0
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 15.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 15.0
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 14.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 14.9
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 14.9
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 14.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 14.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 14.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 14.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 14.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 14.3
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 12.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 10.8
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

21.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 21.4
FF:10159-103A6 76 years, female 22.1
FF:10181-103D1 60 years, female 20.6

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.8
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 20.8
Samples: 2

Max nTPM: 24.2
Min nTPM: 17.3
Sample A 17.3
Sample B 24.2
Ventral spinal cord
nTPM: 25.8
Samples: 1

Max nTPM: 25.8
Min nTPM: 25.8
Sample A 25.8

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.9
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 25.2
Samples: 4

Max nTPM: 35.0
Min nTPM: 20.2
Sample A Female 35.0
Sample B Female 20.2
Sample C Male 24.4
Sample D Male 21.0
Ventral spinal cord
nTPM: 30.9
Samples: 4

Max nTPM: 36.9
Min nTPM: 23.9
Sample A Female 36.9
Sample B Female 30.4
Sample C Male 32.2
Sample D Male 23.9

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.5
Mouse sample Sample description nTPM
Spinal cord
nTPM: 10.5
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.7
Sample A 9.7
Sample B 10.9
Sample C 10.7
Sample D 10.8

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.5
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 29.5
Samples: 4

Max nTPM: 32.9
Min nTPM: 25.7
Sample A 28.5
Sample A 30.8
Sample A 32.9
Sample A 25.7

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