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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
88.7
nTPM
GTEx:
88.7
nTPM
FANTOM5:
0.3
Scaled Tags Per Million
Pig:
33.7
nTPM
Mouse:
5.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
88.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 88.7
Samples: 105
Max nTPM: 369.5
Min nTPM: 4.1
Std nTPM: 61.2
Median nTPM:
266_1
85 years, male
369.5
377_1
82 years, female
293.6
415_1
77 years, female
272.9
229_1
69 years, female
235.8
353_1
82 years, female
191.4
425_1
59 years, female
190.3
265_1
87 years, male
171.4
163_1
78 years, male
168.3
405_1
91 years, male
166.0
177_1
74 years, male
163.9
243_1
75 years, male
161.3
99_1
64 years, male
160.2
468_1
89 years, male
152.0
335_1
73 years, female
149.2
376_1
75 years, female
148.7
351_1
91 years, male
148.2
318_1
68 years, male
141.2
356_1
87 years, female
138.8
109_1
81 years, female
137.9
526_1
61 years, male
137.9
246_1
77 years, male
134.2
315_1
62 years, female
133.7
142_1
61 years, female
131.3
503_1
68 years, male
130.1
237_1
82 years, male
128.4
308_1
70 years, female
128.1
35_1
74 years, female
122.3
286_1
68 years, female
118.4
18_1
88 years, male
117.1
414_1
84 years, female
114.6
355_1
70 years, female
112.1
264_1
73 years, female
111.8
217_1
76 years, male
110.6
313_1
79 years, female
110.0
350_1
84 years, female
102.7
115_1
83 years, male
99.6
320_1
89 years, female
97.8
172_1
72 years, female
97.3
292_1
71 years, male
94.8
317_1
60 years, male
93.2
153_1
70 years, female
92.4
251_1
78 years, male
91.8
17_1
71 years, male
88.6
32_1
67 years, male
88.3
311_1
78 years, male
87.9
314_1
67 years, male
81.8
518_1
75 years, female
77.9
162_1
79 years, female
76.8
404_1
82 years, female
76.0
288_1
66 years, female
74.2
499_1
55 years, female
73.5
406_1
79 years, male
72.2
189_1
76 years, male
69.5
254_1
77 years, female
68.8
466_1
57 years, female
68.1
4_1
88 years, female
67.3
394_1
75 years, female
67.3
517_1
88 years, male
65.8
495_1
57 years, female
64.6
9_1
66 years, female
63.6
501_1
88 years, male
61.1
506_1
65 years, male
58.8
379_1
60 years, male
58.0
295_1
61 years, female
56.6
349_1
83 years, male
56.6
316_1
62 years, male
55.0
352_1
62 years, male
54.5
386_1
76 years, male
54.5
375_1
74 years, female
53.3
120_1
70 years, female
51.4
480_1
63 years, male
50.7
319_1
81 years, male
50.5
6_1
73 years, female
50.4
322_1
76 years, male
49.4
293_1
68 years, female
48.5
119_1
70 years, female
47.9
126_1
63 years, male
47.9
354_1
81 years, female
47.9
149_1
88 years, male
45.7
291_1
76 years, male
45.4
81_1
67 years, male
44.5
324_1
76 years, male
44.5
348_1
84 years, male
43.0
384_1
83 years, male
42.7
139_1
64 years, female
40.7
452_1
88 years, female
40.0
42_1
85 years, male
39.9
43_1
64 years, female
39.9
2_1
77 years, female
38.1
413_1
59 years, female
37.7
447_1
81 years, male
37.7
396_1
62 years, male
37.3
389_1
86 years, female
34.2
117_1
61 years, male
33.4
173_1
67 years, male
30.5
218_1
71 years, female
29.4
137_1
83 years, male
26.6
89_1
63 years, male
24.6
321_1
62 years, female
21.8
307_1
66 years, female
20.8
145_1
84 years, male
20.0
347_1
72 years, male
15.6
41_1
94 years, female
12.9
491_1
89 years, female
8.8
490_1
67 years, female
4.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
