We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SMIM24
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SMIM24
TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
Tissue methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:34.0 nTPM
HPA:25.2 nTPM
GTEx:34.0 nTPM
FANTOM5:26.5 Scaled Tags Per Million
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA045046Antibody HPA056027
Cholangiocytes Not detectedNot detected
Hepatocytes MediumNot detected





LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.2
N/A
Female, age 60
Liver sample 21
nTPM: 3.2
overview
Male, age 54
Liver sample 23
nTPM: 30.1
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 3.2
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 4.5
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 15.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 0.6
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 92.4
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 2.6
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 98.3
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 2.1
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.0
GTEx sample id Sample description nTPM
Liver
Average nTPM: 34.0
Samples: 262

Max nTPM: 352.4
Min nTPM: 0.0
Std nTPM: 55.3
Median nTPM: 5.6
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 352.4
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 320.6
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 277.0
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 236.8
GTEX-11GSP-0626-SM-5986T 60-69 years, female 226.4
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 216.7
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 192.5
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 187.5
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 178.8
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 166.9
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 161.6
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 154.0
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 139.5
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 138.2
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 137.4
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 136.1
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 126.7
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 124.8
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 123.9
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 123.9
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 122.7
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 117.1
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 116.7
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 111.7
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 104.0
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 102.0
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 96.1
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 95.0
GTEX-RU72-1426-SM-46MUF 50-59 years, female 94.6
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 94.3
GTEX-RN64-1826-SM-48FDV 50-59 years, male 88.9
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 86.4
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 86.3
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 79.8
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 79.5
GTEX-R53T-0326-SM-48FEC 50-59 years, female 79.5
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 78.6
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 78.0
GTEX-Q734-0326-SM-48U15 40-49 years, female 77.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 75.6
GTEX-QEL4-1226-SM-447A4 50-59 years, male 75.3
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 74.0
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 73.6
GTEX-YECK-1926-SM-4W21H 60-69 years, male 73.1
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 73.0
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 71.5
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 70.5
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 69.5
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 67.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 63.2
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 61.9
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 61.8
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 60.4
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 60.3
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 59.0
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 58.8
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 57.2
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 56.4
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 56.1
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 55.9
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 55.4
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 54.9
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 53.6
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 53.3
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 52.9
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 51.7
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 50.5
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 50.2
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 49.6
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 48.9
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 48.9
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 48.4
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 46.9
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 42.9
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 42.6
GTEX-1B933-1226-SM-731DW 50-59 years, female 38.7
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 37.9
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 36.8
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 36.0
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 34.8
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 33.8
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 33.1
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 32.0
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 31.5
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 31.3
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 31.0
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 28.2
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 28.2
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 27.4
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 26.0
GTEX-111FC-1226-SM-HAV27 60-69 years, male 25.2
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 25.0
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 24.7
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 23.9
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 22.0
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 20.2
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 19.5
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 18.4
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 17.4
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 17.4
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 16.9
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 16.7
GTEX-13113-1326-SM-5GCOI 60-69 years, female 16.3
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 15.9
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 15.6
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 15.3
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 14.9
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 13.8
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 12.8
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 12.4
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 11.5
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 11.2
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 11.1
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 10.8
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 10.4
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 10.2
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 10.1
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 9.8
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 9.4
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 9.2
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 8.3
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 6.9
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 6.6
GTEX-1399T-0826-SM-5IFES 60-69 years, male 6.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 6.4
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 6.4
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 6.2
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 5.8
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 5.8
GTEX-14PHX-0526-SM-664NW 50-59 years, male 5.7
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 5.7
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 5.6
GTEX-X261-1726-SM-4PQYT 50-59 years, male 5.6
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 5.5
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 5.4
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 5.4
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 5.4
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 5.2
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 5.1
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 5.1
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 5.0
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 4.9
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 4.8
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 4.8
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 4.4
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 4.4
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 4.4
GTEX-14XAO-0226-SM-68728 60-69 years, female 4.3
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 4.1
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 4.0
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 4.0
GTEX-14E7W-1526-SM-6871X 70-79 years, male 3.9
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 3.9
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 3.9
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 3.8
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 3.6
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 3.6
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 3.4
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 3.4
GTEX-18A66-2026-SM-7189C 60-69 years, male 3.2
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 3.2
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 2.9
GTEX-18465-1626-SM-7LG6N 50-59 years, male 2.7
GTEX-1B932-1426-SM-793AN 40-49 years, female 2.7
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 2.6
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 2.4
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 2.3
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 2.3
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 2.2
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 2.1
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 2.1
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 2.0
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 2.0
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 2.0
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 2.0
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 1.9
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 1.9
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 1.8
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 1.8
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 1.7
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 1.7
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 1.7
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 1.6
GTEX-14JG1-1626-SM-664NH 40-49 years, male 1.6
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 1.6
GTEX-17HHE-0126-SM-79398 50-59 years, male 1.5
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 1.5
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 1.5
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 1.5
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 1.4
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 1.4
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 1.3
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 1.3
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 1.3
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 1.3
GTEX-QESD-2026-SM-447BI 20-29 years, male 1.3
GTEX-11ZUS-2526-SM-59872 30-39 years, male 1.2
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 1.2
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 1.2
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 1.2
GTEX-12696-0826-SM-5EGGE 60-69 years, male 1.1
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 1.1
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 1.1
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 1.0
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 1.0
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 1.0
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 1.0
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 0.9
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 0.9
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 0.9
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 0.9
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 0.9
GTEX-13112-1426-SM-5EGH8 50-59 years, male 0.8
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 0.8
GTEX-O5YV-0726-SM-EV798 60-69 years, female 0.8
GTEX-REY6-1226-SM-48FDR 60-69 years, male 0.8
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 0.7
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 0.7
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 0.7
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 0.7
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 0.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 0.7
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 0.7
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 0.7
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 0.7
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 0.6
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 0.6
GTEX-14PJO-1726-SM-68719 60-69 years, male 0.6
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 0.6
GTEX-18A7A-1526-SM-72D69 50-59 years, female 0.6
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 0.6
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 0.6
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 0.6
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 0.5
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 0.5
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 0.5
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 0.5
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 0.5
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 0.5
GTEX-P78B-1326-SM-3P611 40-49 years, female 0.5
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 0.5
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 0.4
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 0.4
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 0.4
GTEX-S32W-1926-SM-4AD63 50-59 years, female 0.4
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 0.4
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 0.3
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 0.3
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 0.3
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 0.3
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 0.2
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 0.2
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 0.2
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 0.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 0.2
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 0.2
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 0.2
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 0.2
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 0.1
GTEX-S33H-1626-SM-4AD68 30-39 years, male 0.1
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 0.1
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 0.0
Show allShow less

LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 26.5
FF:10018-101C9 64,69,70 years, mixed 26.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo