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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:130.6 nTPM
HPA Brain:207.7 nTPM
GTEx:130.6 nTPM
Pig:87.4 nTPM
Mouse:338.0 nTPM
Allen mouse:14.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

207.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 166.4
2226 Male, age 75, left hemisphere 230.6
1961 Female, age 42, unknown 102.3
Dorsomedial nucleus
nTPM: 114.1
1989 Male, age 62, unknown 165.3
2041 Female, age 72, unknown 101.4
2017 Female, age 42, unknown 75.5
Lateral hypothalamic area
nTPM: 207.7
2271 Male, age 75, both hemispheres 276.2
2228 Male, age 66, unknown 264.9
1791 Male, age 80, right hemisphere 184.9
2412 Male, age 62, unknown 104.9
Mammillary body
nTPM: 119.0
1923 Female, age 72, unknown 186.6
2413 Male, age 66, unknown 131.2
1948 Female, age 72, unknown 103.1
1945 Male, age 80, right hemisphere 92.0
1834 Female, age 42, unknown 82.1
Paraventricular nucleus
nTPM: 86.2
2700 Male, age 62, unknown 86.2
Preoptic area
nTPM: 109.0
1907 Male, age 80, right hemisphere 141.6
2414 Female, age 72, unknown 100.0
1861 Female, age 42, unknown 85.4
Supraoptic nucleus
nTPM: 77.5
2835 Female, age 72, unknown 89.2
1894 Female, age 72, unknown 75.8
2043 Male, age 62, unknown 67.4
Ventromedial nucleus
nTPM: 109.3
1982 Female, age 72, unknown 127.5
1822 Female, age 42, unknown 91.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 130.6
Samples: 257

Max nTPM: 337.1
Min nTPM: 22.2
Std nTPM: 55.8
Median nTPM: 128.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 337.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 319.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 293.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 280.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 275.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 269.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 258.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 252.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 244.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 243.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 241.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 235.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 228.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 219.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 217.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 211.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 210.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 207.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 205.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 205.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 199.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 197.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 195.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 193.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 193.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 192.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 192.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 191.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 191.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 190.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 188.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 187.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 187.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 187.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 187.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 186.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 186.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 185.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 184.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 183.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 182.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 182.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 181.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 179.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 179.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 178.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 178.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 178.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 178.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 177.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 177.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 177.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 176.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 176.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 174.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 173.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 172.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 172.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 171.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 170.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 169.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 168.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 168.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 167.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 167.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 166.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 164.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 163.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 163.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 163.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 162.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 162.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 162.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 162.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 161.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 160.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 160.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 160.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 159.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 159.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 159.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 157.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 157.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 152.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 152.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 152.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 152.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 151.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 149.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 148.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 148.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 147.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 147.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 146.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 146.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 146.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 146.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 145.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 145.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 145.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 145.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 144.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 143.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 142.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 142.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 141.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 141.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 141.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 140.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 138.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 138.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 138.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 138.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 138.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 136.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 136.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 136.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 133.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 133.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 131.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 131.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 131.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 131.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 130.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 129.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 128.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 128.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 128.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 128.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 127.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 127.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 126.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 125.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 124.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 123.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 123.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 123.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 121.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 121.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 121.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 121.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 120.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 120.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 120.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 119.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 119.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 119.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 119.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 118.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 118.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 116.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 116.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 116.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 115.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 114.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 114.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 113.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 113.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 113.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 112.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 112.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 112.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 111.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 111.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 108.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 107.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 107.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 105.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 105.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 104.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 103.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 102.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 102.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 102.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 102.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 101.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 101.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 101.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 100.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 100.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 100.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 100.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 99.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 99.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 97.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 96.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 94.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 94.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 94.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 93.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 91.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 90.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 88.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 88.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 88.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 88.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 87.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 86.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 84.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 84.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 84.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 83.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 83.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 82.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 82.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 82.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 81.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 80.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 80.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 79.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 78.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 77.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 76.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 76.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 75.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 73.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 73.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 70.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 69.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 69.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 69.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 68.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 67.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 67.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 64.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 63.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 61.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 58.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 56.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 56.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 55.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 55.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 55.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 53.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 53.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 53.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 52.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 49.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 48.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 48.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 47.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 46.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 44.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 43.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 43.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 40.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 39.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 39.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 36.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 35.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 35.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 31.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 30.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 30.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 25.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 22.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 87.4
Samples: 4

Max nTPM: 107.0
Min nTPM: 76.2
Sample A Female 107.0
Sample B Female 83.0
Sample C Male 76.2
Sample D Male 83.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

338.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 338.1
Samples: 4

Max nTPM: 366.2
Min nTPM: 326.2
Sample A Male 333.4
Sample B Male 366.2
Sample C Female 326.4
Sample D Female 326.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.3
146 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 14.3
145 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 14.0

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