We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
STX1B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • STX1B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

151.919
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:43.2 nTPM
HPA Brain:127.7 nTPM
GTEx:43.2 nTPM
Pig:89.1 nTPM
Mouse:208.1 nTPM
Allen mouse:16.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079008
Hypothalamus mean intensity 151.919
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 82.640
Mammillary nucleus 99.454
Periventricular hypothalamic nucleus 124.723
Supraoptic nucleus 90.481
Tuberal nucleus 83.722
Ventral tuberomammillary nucleus 67.525
Lateral preoptic area 71.640
Medial preoptic area 93.734
Suprachiasmatic nucleus 88.186
Paraventricular hypothalamic nucleus 100.157
Anterior hypothalamic area, central 86.732
Ventral medial hypothalamic nucleus 76.501
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 80.766
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 79.121
Dorsal medial hypothalamic nucleus 76.833
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 106.4
2226 Male, age 75, left hemisphere 124.8
1961 Female, age 42, unknown 88.0
Dorsomedial nucleus
nTPM: 97.0
1989 Male, age 62, unknown 124.2
2017 Female, age 42, unknown 90.0
2041 Female, age 72, unknown 76.9
Lateral hypothalamic area
nTPM: 127.7
2228 Male, age 66, unknown 197.3
1791 Male, age 80, right hemisphere 108.8
2271 Male, age 75, both hemispheres 106.9
2412 Male, age 62, unknown 97.8
Mammillary body
nTPM: 119.2
1923 Female, age 72, unknown 160.3
2413 Male, age 66, unknown 143.5
1948 Female, age 72, unknown 113.8
1834 Female, age 42, unknown 100.2
1945 Male, age 80, right hemisphere 78.2
Paraventricular nucleus
nTPM: 98.6
2700 Male, age 62, unknown 98.6
Preoptic area
nTPM: 98.6
1907 Male, age 80, right hemisphere 121.7
1861 Female, age 42, unknown 102.3
2414 Female, age 72, unknown 71.7
Supraoptic nucleus
nTPM: 58.0
2835 Female, age 72, unknown 87.0
1894 Female, age 72, unknown 47.9
2043 Male, age 62, unknown 39.1
Ventromedial nucleus
nTPM: 110.8
1982 Female, age 72, unknown 132.9
1822 Female, age 42, unknown 88.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 43.2
Samples: 257

Max nTPM: 91.3
Min nTPM: 7.7
Std nTPM: 16.6
Median nTPM: 43.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 91.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 85.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 82.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 81.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 81.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 80.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 80.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 78.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 76.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 75.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 74.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 71.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 71.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 69.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 69.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 68.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 68.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 68.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 67.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 67.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 67.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 66.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 66.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 65.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 65.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 65.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 64.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 64.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 64.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 64.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 63.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 63.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 63.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 62.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 62.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 62.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 62.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 61.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 61.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 60.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 60.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 60.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 60.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 60.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 60.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 60.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 59.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 59.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 59.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 58.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 58.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 58.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 57.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 56.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 56.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 56.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 56.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 56.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 56.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 55.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 55.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 55.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 54.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 54.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 54.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 53.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 53.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 53.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 53.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 53.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 53.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 53.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 52.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 52.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 52.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 52.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 52.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 51.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 51.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 51.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 51.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 51.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 51.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 51.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 50.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 50.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 49.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 49.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 49.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 48.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 48.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 48.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 48.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 48.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 48.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 48.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 47.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 47.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 47.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 47.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 47.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 47.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 47.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 46.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 46.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 46.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 46.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 46.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 45.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 45.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 45.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 45.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 45.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 45.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 45.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 45.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 45.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 44.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 44.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 44.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 44.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 44.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 44.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 43.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 43.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 43.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 43.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 43.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 43.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 43.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 43.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 43.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 42.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 42.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 42.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 42.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 42.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 42.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 42.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 41.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 40.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 39.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 39.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 39.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 39.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 39.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 38.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 38.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 38.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 38.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 38.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 38.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 38.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 38.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 37.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 37.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 37.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 37.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 37.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 37.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 37.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 36.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 36.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 36.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 36.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 36.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 35.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 35.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 35.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 35.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 35.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 35.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 34.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 34.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 34.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 34.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 34.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 34.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 34.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 33.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 33.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 33.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 32.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 32.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 32.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 32.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 32.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 32.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 32.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 31.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 31.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 31.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 30.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 30.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 30.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 30.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 30.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 29.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 29.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 29.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 28.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 28.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 28.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 28.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 28.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 28.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 28.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 27.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 27.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 26.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 26.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 26.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 26.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 26.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 26.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 25.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 25.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 24.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 24.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 24.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 24.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 24.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 23.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 23.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 23.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 23.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 23.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 22.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 22.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 22.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 21.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 21.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 21.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 21.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 20.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 20.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 19.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 19.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 18.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 18.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 18.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 17.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 16.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 15.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 14.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 14.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 13.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 13.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 12.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 11.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 11.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 11.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 10.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 10.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 7.7
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 89.1
Samples: 4

Max nTPM: 116.0
Min nTPM: 70.0
Sample A Female 116.0
Sample B Female 88.6
Sample C Male 81.6
Sample D Male 70.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 208.1
Samples: 4

Max nTPM: 225.3
Min nTPM: 198.7
Sample A Male 198.7
Sample B Male 203.8
Sample C Female 225.3
Sample D Female 204.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.3
100144175 Antisense, RP_110407_03_C11, Mouse strain C57BL/6J (56 days, male) 16.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo