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  • SUMMARY

  • TISSUE

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  • BCL7C
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:41.9 nTPM
HPA Brain:48.6 nTPM
GTEx:41.9 nTPM
Pig:23.8 nTPM
Mouse:8.0 nTPM
Allen mouse:0.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 47.3
1961 Female, age 42, unknown 54.2
2226 Male, age 75, left hemisphere 40.4
Dorsomedial nucleus
nTPM: 45.8
1989 Male, age 62, unknown 47.3
2017 Female, age 42, unknown 45.5
2041 Female, age 72, unknown 44.7
Lateral hypothalamic area
nTPM: 43.5
2412 Male, age 62, unknown 46.8
1791 Male, age 80, right hemisphere 44.0
2228 Male, age 66, unknown 43.7
2271 Male, age 75, both hemispheres 39.4
Mammillary body
nTPM: 40.7
1948 Female, age 72, unknown 43.3
1945 Male, age 80, right hemisphere 42.5
1834 Female, age 42, unknown 40.3
2413 Male, age 66, unknown 40.0
1923 Female, age 72, unknown 37.1
Paraventricular nucleus
nTPM: 48.6
2700 Male, age 62, unknown 48.6
Preoptic area
nTPM: 45.1
2414 Female, age 72, unknown 45.6
1907 Male, age 80, right hemisphere 45.1
1861 Female, age 42, unknown 44.7
Supraoptic nucleus
nTPM: 45.9
2043 Male, age 62, unknown 47.4
2835 Female, age 72, unknown 46.1
1894 Female, age 72, unknown 44.1
Ventromedial nucleus
nTPM: 45.2
1982 Female, age 72, unknown 48.4
1822 Female, age 42, unknown 41.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 41.9
Samples: 257

Max nTPM: 109.8
Min nTPM: 11.7
Std nTPM: 14.6
Median nTPM: 38.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 109.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 106.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 97.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 96.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 96.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 88.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 82.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 78.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 72.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 71.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 70.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 69.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 68.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 68.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 68.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 68.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 67.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 65.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 64.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 62.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 62.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 62.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 61.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 61.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 60.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 60.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 59.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 59.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 58.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 57.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 57.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 56.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 56.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 56.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 55.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 55.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 54.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 54.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 54.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 54.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 54.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 54.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 53.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 53.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 52.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 52.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 51.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 51.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 50.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 50.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 50.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 50.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 49.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 49.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 49.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 48.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 48.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 48.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 47.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 47.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 47.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 47.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 47.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 47.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 47.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 46.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 46.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 46.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 46.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 46.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 46.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 45.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 45.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 45.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 45.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 45.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 45.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 44.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 44.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 44.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 44.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 44.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 44.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 44.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 44.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 44.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 43.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 43.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 43.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 43.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 43.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 43.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 43.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 43.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 43.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 42.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 42.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 42.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 42.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 42.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 41.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 41.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 41.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 41.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 41.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 40.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 40.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 40.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 40.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 40.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 40.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 40.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 40.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 40.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 40.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 40.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 39.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 39.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 39.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 39.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 39.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 39.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 39.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 39.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 39.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 39.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 39.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 38.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 38.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 38.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 38.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 38.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 38.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 38.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 38.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 38.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 37.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 37.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 37.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 37.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 37.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 37.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 37.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 37.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 37.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 36.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 36.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 36.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 36.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 36.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 36.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 36.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 36.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 36.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 36.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 35.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 35.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 35.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 35.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 35.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 35.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 35.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 35.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 35.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 35.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 35.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 35.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 35.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 35.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 35.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 35.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 35.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 35.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 34.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 34.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 34.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 34.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 34.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 34.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 34.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 34.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 34.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 34.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 33.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 33.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 33.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 33.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 33.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 33.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 33.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 33.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 32.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 32.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 32.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 32.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 32.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 32.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 32.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 32.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 32.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 32.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 32.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 32.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 32.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 32.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 32.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 31.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 31.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 31.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 31.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 31.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 31.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 30.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 30.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 30.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 30.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 30.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 30.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 30.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 29.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 29.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 29.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 29.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 29.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 29.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 29.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 29.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 28.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 28.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 28.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 27.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 27.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 27.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 27.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 27.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 27.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 27.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 26.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 26.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 26.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 26.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 25.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 25.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 25.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 24.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 24.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 23.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 23.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 23.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 23.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 22.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 18.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 14.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 13.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 13.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 11.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 23.8
Samples: 4

Max nTPM: 29.3
Min nTPM: 17.7
Sample A Female 29.3
Sample B Female 24.3
Sample C Male 23.9
Sample D Male 17.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 8.1
Samples: 4

Max nTPM: 8.4
Min nTPM: 7.9
Sample A Male 8.0
Sample B Male 8.4
Sample C Female 7.9
Sample D Female 7.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.8
633284 Antisense, RP_040907_02_D11, Mouse strain C57BL/6J (56 days, male) 0.8

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