HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:202.5 nTPM
HPA Brain:160.2 nTPM
GTEx:202.5 nTPM
FANTOM5:260.3 Scaled Tags Per Million
Pig:310.0 nTPM
Mouse:293.1 nTPM
Allen mouse:20.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002865
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 160.2
Sample id Sample description nTPM
Hippocampus
nTPM: 160.2
1898 Male, age 80, left hemisphere 207.1
2621 Female, age 67, right hemisphere 163.5
2148 Female, age 91, left hemisphere 161.2
2529 Female, age 94, left hemisphere 154.8
1911 Female, age 85, right hemisphere 138.8
1855 Male, age 76, left hemisphere 135.5
Dentate gyrus
nTPM: 158.5
2530 Female, age 94, left hemisphere 214.0
2528 Male, age 74, both hemispheres 160.8
1927 Female, age 91, both hemispheres 154.7
2010 Male, age 76, both hemispheres 149.1
2246 Female, age 85, both hemispheres 136.9
2531 Female, age 67, both hemispheres 135.3
Entorhinal gyrus
nTPM: 142.3
2764 Male, age 80, right hemisphere 180.3
2117 Female, age 91, right hemisphere 159.6
1787 Male, age 76, left hemisphere 140.4
2613 Female, age 94, left hemisphere 138.7
1938 Female, age 85, left hemisphere 137.1
2686 Male, age 75, right hemisphere 97.9
Hippocampus, CA1
nTPM: 149.0
2749 Male, age 80, left hemisphere 256.3
2527 Male, age 74, both hemispheres 163.0
1873 Female, age 85, both hemispheres 140.0
2045 Male, age 76, both hemispheres 93.5
2082 Female, age 91, right hemisphere 92.4
Hippocampus, CA2
nTPM: 151.0
1963 Male, age 80, left hemisphere 198.1
2249 Male, age 74, both hemispheres 171.7
2437 Female, age 94, left hemisphere 163.5
1892 Male, age 76, both hemispheres 145.4
1940 Female, age 85, left hemisphere 119.9
2113 Female, age 91, right hemisphere 107.7
Hippocampus, CA3
nTPM: 142.6
2436 Male, age 74, both hemispheres 173.8
2861 Female, age 67, both hemispheres 159.1
2137 Male, age 80, left hemisphere 146.4
2620 Female, age 94, left hemisphere 132.5
1867 Male, age 76, both hemispheres 132.4
1891 Female, age 85, both hemispheres 111.3
Parahippocampal cortex
nTPM: 136.8
2245 Female, age 91, both hemispheres 176.1
1990 Female, age 91, right hemisphere 157.0
2250 Female, age 67, right hemisphere 152.2
2622 Female, age 67, right hemisphere 151.1
2532 Female, age 72, left hemisphere 149.3
1933 Female, age 85, both hemispheres 138.2
1850 Male, age 80, both hemispheres 119.9
2018 Male, age 76, both hemispheres 116.2
2692 Male, age 74, both hemispheres 110.2
2693 Female, age 94, both hemispheres 97.3
Perirhinal gyrus
nTPM: 133.2
1794 Male, age 80, right hemisphere 163.3
1847 Female, age 91, left hemisphere 156.2
2521 Female, age 94, right hemisphere 133.5
1841 Female, age 85, right hemisphere 117.2
2848 Male, age 76, right hemisphere 95.7
Subiculum
nTPM: 139.0
2619 Male, age 74, both hemispheres 163.2
1977 Female, age 85, both hemispheres 160.1
1901 Male, age 80, both hemispheres 155.1
2729 Female, age 91, right hemisphere 130.8
2438 Female, age 94, left hemisphere 120.0
2042 Male, age 76, both hemispheres 104.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 202.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 202.5
Samples: 255

Max nTPM: 421.4
Min nTPM: 40.1
Std nTPM: 68.5
Median nTPM: 194.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 421.4
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 416.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 403.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 384.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 376.0
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 373.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 370.7
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 350.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 346.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 345.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 342.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 260.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 260.3
FF:10169-103B7 60 years, female 298.0
FF:10153-102I9 76 years, female 222.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 310.0
Pig sample Sample description nTPM
Subiculum
nTPM: 260.3
Samples: 4

Max nTPM: 334.4
Min nTPM: 222.4
Sample A Female 334.4
Sample B Female 243.1
Sample C Male 241.4
Sample D Male 222.4
Dorsal hippocampus
nTPM: 310.0
Samples: 4

Max nTPM: 415.5
Min nTPM: 242.7
Sample A Female 415.5
Sample B Female 303.5
Sample C Male 278.3
Sample D Male 242.7
Entorhinal cortex
nTPM: 277.9
Samples: 4

Max nTPM: 310.2
Min nTPM: 233.3
Sample A Female 285.9
Sample B Female 310.2
Sample C Male 282.3
Sample D Male 233.3
Ventral hippocampus
nTPM: 299.9
Samples: 4

Max nTPM: 355.3
Min nTPM: 208.5
Sample A Female 329.7
Sample B Female 208.5
Sample C Male 355.3
Sample D Male 305.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 293.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 277.4
Samples: 4

Max nTPM: 295.9
Min nTPM: 256.0
Sample A Male 256.0
Sample B Male 277.4
Sample C Female 280.1
Sample D Female 295.9
Hippocampal formation
nTPM: 293.1
Samples: 4

Max nTPM: 316.9
Min nTPM: 268.0
Sample A Male 292.5
Sample B Male 268.0
Sample C Female 295.0
Sample D Female 316.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 20.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.7
81600110 Antisense, RP_080205_02_D02, Mouse strain C57BL/6J (56 days, male) 21.3
413792 Antisense, RP_040809_01_E02, Mouse strain C57BL/6J (56 days, male) 20.0

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