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ATP5F1D
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  • TISSUE

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  • ATP5F1D
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:166.6 nTPM
HPA Brain:171.8 nTPM
GTEx:166.6 nTPM
Pig:220.9 nTPM
Mouse:188.0 nTPM
Allen mouse:13.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 114.6
2226 Male, age 75, left hemisphere 124.4
1961 Female, age 42, unknown 104.7
Dorsomedial nucleus
nTPM: 127.2
1989 Male, age 62, unknown 192.9
2017 Female, age 42, unknown 98.8
2041 Female, age 72, unknown 90.0
Lateral hypothalamic area
nTPM: 130.5
1791 Male, age 80, right hemisphere 171.3
2271 Male, age 75, both hemispheres 136.6
2228 Male, age 66, unknown 110.4
2412 Male, age 62, unknown 103.7
Mammillary body
nTPM: 171.8
1923 Female, age 72, unknown 266.7
2413 Male, age 66, unknown 165.1
1948 Female, age 72, unknown 152.6
1834 Female, age 42, unknown 143.1
1945 Male, age 80, right hemisphere 131.5
Paraventricular nucleus
nTPM: 78.5
2700 Male, age 62, unknown 78.5
Preoptic area
nTPM: 109.1
1861 Female, age 42, unknown 118.2
1907 Male, age 80, right hemisphere 116.2
2414 Female, age 72, unknown 92.9
Supraoptic nucleus
nTPM: 110.5
2835 Female, age 72, unknown 132.8
1894 Female, age 72, unknown 110.6
2043 Male, age 62, unknown 88.1
Ventromedial nucleus
nTPM: 98.6
1982 Female, age 72, unknown 118.2
1822 Female, age 42, unknown 78.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 166.6
Samples: 257

Max nTPM: 386.3
Min nTPM: 45.2
Std nTPM: 51.2
Median nTPM: 160.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 386.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 319.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 309.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 300.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 299.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 289.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 289.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 289.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 286.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 286.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 284.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 283.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 280.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 276.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 263.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 263.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 256.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 255.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 254.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 251.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 251.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 244.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 244.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 243.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 236.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 234.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 234.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 233.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 231.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 228.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 228.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 226.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 225.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 220.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 217.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 215.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 215.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 214.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 214.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 213.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 211.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 209.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 209.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 208.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 207.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 205.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 204.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 202.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 202.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 201.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 201.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 201.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 201.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 200.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 200.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 199.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 199.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 198.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 198.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 197.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 196.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 196.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 194.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 193.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 190.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 190.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 190.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 188.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 188.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 185.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 185.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 184.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 184.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 183.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 183.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 181.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 181.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 181.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 181.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 180.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 179.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 179.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 179.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 179.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 179.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 178.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 178.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 178.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 177.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 176.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 176.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 176.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 176.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 176.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 175.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 174.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 174.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 174.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 171.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 171.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 171.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 170.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 169.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 169.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 169.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 168.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 168.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 167.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 166.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 166.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 166.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 166.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 165.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 165.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 164.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 164.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 164.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 163.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 162.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 162.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 162.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 162.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 161.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 161.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 161.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 160.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 160.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 160.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 160.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 160.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 159.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 158.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 156.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 156.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 155.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 155.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 154.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 154.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 154.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 154.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 153.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 153.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 152.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 152.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 151.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 151.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 150.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 149.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 149.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 149.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 148.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 148.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 148.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 148.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 147.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 146.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 145.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 145.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 145.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 144.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 143.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 143.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 142.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 142.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 142.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 141.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 141.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 141.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 140.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 138.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 138.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 138.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 137.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 137.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 137.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 137.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 136.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 136.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 135.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 135.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 135.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 135.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 135.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 133.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 133.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 133.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 133.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 133.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 133.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 133.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 132.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 132.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 132.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 131.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 131.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 130.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 130.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 129.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 129.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 128.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 128.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 128.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 128.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 127.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 127.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 127.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 127.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 126.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 126.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 125.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 125.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 124.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 124.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 124.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 124.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 123.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 123.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 123.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 121.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 121.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 120.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 120.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 119.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 119.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 118.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 118.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 117.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 116.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 116.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 115.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 115.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 113.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 113.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 112.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 110.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 109.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 109.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 107.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 106.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 105.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 105.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 105.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 103.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 101.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 100.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 97.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 97.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 94.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 94.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 90.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 83.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 79.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 77.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 66.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 57.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 52.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 45.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 220.9
Samples: 4

Max nTPM: 286.9
Min nTPM: 159.8
Sample A Female 286.9
Sample B Female 229.3
Sample C Male 207.5
Sample D Male 159.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 188.0
Samples: 4

Max nTPM: 214.0
Min nTPM: 167.1
Sample A Male 192.4
Sample B Male 214.0
Sample C Female 167.1
Sample D Female 178.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 13.9
81600110 Antisense, RP_080205_02_D02, Mouse strain C57BL/6J (56 days, male) 16.7
413792 Antisense, RP_040809_01_E02, Mouse strain C57BL/6J (56 days, male) 11.1

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